FR-IMGT and CDR-IMGT lengths: Channel catfish (Ictalurus punctatus) IGHV

Only FUNCTIONAL and ORF V-GENEs are shown.

IGHV
subgroup
FR1-IMGT
1 to 26
CDR1-IMGT
27 to 38
FR2-IMGT
39 to 55
CDR2-IMGT
56 to 65
FR3-IMGT
66 to 104
CDR3-IMGT
(germline V-GENE)
105 to 115
(25) (5-8,10,12) (17) (6 to 8) (38) (2,3)
IGHV1 -1 (aa 10) 6,7,8
 
7 -1 (aa 73) 3
IGHV2 -1 (aa 10) 7
 
7 -1 (aa 73) 3 (1)
IGHV3 -1 (aa 10) 8
 
6,7,8 -1 (aa 73) 3
IGHV4 -1 (aa 10) 10
 
7 -1 (aa 73) 3
IGHV5 -1 (aa 10) 12
 
7 -1 (aa 73) 3 (1)
IGHV6 -1 (aa 10) 10
 
7 -1 (aa 73) 3
IGHV7 -1 (aa 10) 8
 
8 -1 (aa 73) 3 (1)
IGHV8 -1 (aa 10) 8
 
9 -1 (aa 73) 3
IGHV9 -1 (aa 10) 8
 
7 -1 (aa 73) 3
IGHV10 -1 (aa 10) 5
 
7 -1 (aa 73) 2
IGHV11 -1 (aa 10) 8
 
7 -1 (aa 73) 3 (1)
IGHV12 -1 (aa 10) 8
 
6 -1 (aa 73) 3
IGHV13 -1 (aa 10) 8
 
8 -1 (aa 73) 3

IMGT note:
(1) Probable CDR3-IMGT length but needs to be confirmed with germline sequences.


Created: 29/04/1999
Last updated: Friday, 27-May-2016 21:01:32 CEST
Authors: Sylvaine Artero and Nathalie Bosc

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