Gene exon/intron splicing sites: Human T cell receptor constant genes TRAC, TRBC, TRGC, TRDC

For more information, see Gene tables TRAC, TRBC, TRGC, TRDC and Alignments of alleles (IMGT Repertoire).

TRC
gene
and
allele name
(1)
5' exon 3' exon codon_start
Exons Last
complete
codon (2)
Codon
resulting
from
splicing
First
complete
codon (2)
Exons
TRAC*01     (N) 1.2
I
ATC
EX1 3
A AT
EX1 124
P
CCA
(E) 2
S
AGT
EX2 3
G AA
EX2 15
T
ACA
(D) 2
T
ACG
EX3 3
G AT
TRBC1*01     (E) 1.7
D
GAC
EX1 3
G AG
EX1 125
A
GCA
(D) 2
C
TGT
EX2 3
G AC
EX2 6
S
TCG
(V) 2
S
TCC
EX3 3
G TG
EX3 36
M
ATG
  1
V
GTC
EX4 1
TRBC2*01     (E) 1.6
D
GAC
EX1 3
G AG
EX1 125
A
GCA
(D) 2
C
TGT
EX2 3
G AC
EX2 6
S
TCC
(E) 2
S
TCT
EX3 3
G AG
EX3 36
M
ATG
  1
V
GTC
EX4 1
TRGC1*01     (D) 1.7
K
AAA
EX1 3
G AT
EX1 126
T
ACA
(D) 2
V
GTC
EX2 3
G AT
EX2 16
N
AAT
(D) 2
T
ACA
EX3 3
G AT
TRGC2*01     (D) 1.7
K
AAA
EX1 3
G AT
EX1 126
T
ACA
(D) 2
V
GTC
EX2T 3
G AT
EX2T 16
N
AAT
(D) 2
V
GTC
EX2 3
G AT
EX2 16
N
AAT
(D) 2
T
ACA
EX3 3
G AT
TRDC*01     (R) 1.1
S
AGT
EX1 3
C GA
EX1 126
T
ACA
(D) 2
H
CAC
EX2 3
G AT
EX2 22
K
AAA
(S) 2
I
ATA
EX3 3
G CC

IMGT notes:
(1)Only allele *01 is shown.
(2)Position of the last complete codon of the 5' exon and that of the first complete codon of the 3' exon are according to the IMGT unique numbering for C-DOMAIN and C-LIKE-DOMAIN.


Created: 12/08/2003
Author: Marie-Paule Lefranc
Editor: Laurent Douchy

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Res., 27:209-212 (1999); doi: 10.1093/nar/27.1.209 Full text Cover; Ruiz, M. et al., Nucleic Acids Res., 28:219-221 (2000); doi: 10.1093/nar/28.1.219 Full text; Lefranc, M.-P., Nucleic Acids Res., 29:207-209 (2001); doi: 10.1093/nar/29.1.207 Full text; Lefranc, M.-P., Nucleic Acids Res., 31:307-310 (2003); doi: 10.1093/nar/gkg085 Full text; Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5:45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33:D593-597 (2005); doi: 10.1093/nar/gki065 Full text; Lefranc, M.-P. et al., Nucleic Acids Res., 37:D1006-1012 (2009); doi: 10.1093/nar/gkn838 Full text; Lefranc, M.-P. et al., Nucleic Acids Res., 43:D413-422 (2015); doi: 10.1093/nar/gku1056 Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.

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