Alignment of alleles: Mouse (Mus musculus, Mus saxicola, Mus pahari, Mus minutoides, Mus cookii, Mus spretus) IGKC

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters.
Dashes indicate identical nucleotides. Dots indicate gaps by comparison to the longest sequence. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

The nucleotide between parentheses at the beginning of exons comes from a DONOR-SPLICE (n from ngt). The first nucleotide from an INT-DONOR-SPLICE is underlined (n from ngt).

Cysteine involved in the disulfide bridge are shown in purple.
STOP-CODON is indicated by an asterisk.

Alleles are described at the species level.

Mouse (Mus musculus) IGKC


                                                                                                            
                                                    1.4 1.3 1.2 1.1   1   2   3   4   5   6   7   8   9  10  11
                                                    (R)  A   D   A   A   P   T   V   S   I   F   P   P   S   S 
  V00807  ,IGKC*01                                (C)GG GCT GAT GCT GCA CCA ACT GTA TCC ATC TTC CCA CCA TCC AGT

  V00777  ,IGKC*01                                (-)-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

  V01569  ,IGKC*01                                (-)-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

  X67003  ,IGKC*01                                (-)-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

  X67004  ,IGKC*01(2)                             (-)-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

  X67005  ,IGKC*01(2)                             (-)-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

  X67006  ,IGKC*01(3)                             (-)-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

  X67007  ,IGKC*01(4)                             (-)-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

  X67010  ,IGKC*01(7)                             (-)-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

  X67012  ,IGKC*01(2)                             (-)-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

  V00806  ,IGKC*01                                (-)-- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67002  ,IGKC*02(1)                             (-)-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

  X67008  ,IGKC*02(5)                             (-)-- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67009  ,IGKC*02(6)                             (-)-- --- --- X-- --- --- --- --- --- --- --- --- --- --- --- 

  X67011  ,IGKC*03(8)                             (-)-- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 

  
                                                ___AB_______                                            ________
                                               15.1    15.3                                                    
                                 12  13  14  15    15.2      16  17  18  19  20  21  22  23  24  25  26  27  28
                                 E   Q   L   T               S   G   G   A   S   V   V   C   F   L   N   N   F 
  V00807  ,IGKC*01              GAG CAG TTA ACA ... ... ... TCT GGA GGT GCC TCA GTC GTG TGC TTC TTG AAC AAC TTC

  V00777  ,IGKC*01              --- --- --- --- ... ... ... --- --- --- --- --- --- --- --- --- --- --- --- ---

  V01569  ,IGKC*01              --- --- --- --- ... ... ... --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67003  ,IGKC*01              --- --- --- --- ... ... ... --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67004  ,IGKC*01(2)           --- --- --- --- ... ... ... --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67005  ,IGKC*01(2)           --- --- --- --- ... ... ... --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67006  ,IGKC*01(3)           --- --- --- --- ... ... ... --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67007  ,IGKC*01(4)           --- --- --- --- ... ... ... --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67010  ,IGKC*01(7)           --- --- --- --- ... ... ... --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67012  ,IGKC*01(2)           --- --- --- --- ... ... ... --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67002  ,IGKC*02(1)           --- --- --- --- ... ... ... --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67008  ,IGKC*02(5)           --- --- --- --- ... ... ... --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67009  ,IGKC*02(6)           --- --- --- --- ... ... ... --- --- --- --- --- --- --- --- --- --- --- --- ---
                                                                                         
  X67011  ,IGKC*03(8)           --- --- --- --- ... ... ... --- --- --- --- --- --- --- --- --- --- --- --- ---


                                 _________BC_____________________                            ___________CD_______
                                                                                           45.1    45.3    45.5
                                 29  30  31  32  33  34  35  36  39  40  41  42  43  44  45    45.2    45.4    
                                 Y   P           K   D   I   N   V   K   W   K   I   D   G   S   E   R   Q   N 
  V00807  ,IGKC*01              TAC CCC ... ... AAA GAC ATC AAT GTC AAG TGG AAG ATT GAT GGC AGT GAA CGA CAA AAT

  V00777  ,IGKC*01              --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  V01569  ,IGKC*01              --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67003  ,IGKC*01              --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67004  ,IGKC*01(2)           --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67005  ,IGKC*01(2)           --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67006  ,IGKC*01(3)           --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67007  ,IGKC*01(4)           --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67010  ,IGKC*01(7)           --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67012  ,IGKC*01(2)           --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67002  ,IGKC*02(1)           --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67008  ,IGKC*02(5)           --- --- ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67009  ,IGKC*02(6)           --- --- ... ... --- -X- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
                                                 R
  X67011  ,IGKC*03(8)           --- --- ... ... -G- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---


                                ________                                _________________________DE_____________
                                   45.7                                84.1    84.3    84.5    84.7    85.6    
                               45.6      77  78  79  80  81  82  83  84    84.2    84.4    84.6    85.7    85.5
                                         G   V   L   N   S   W   T   D   Q   D   S   K   D                     
  V00807  ,IGKC*01              ... ... GGC GTC CTG AAC AGT TGG ACT GAT CAG GAC AGC AAA GAC ... ... ... ... ...

  V00777  ,IGKC*01              ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  V01569  ,IGKC*01              ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67003  ,IGKC*01              ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67004  ,IGKC*01(2)           ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67005  ,IGKC*01(2)           ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67006  ,IGKC*01(3)           ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67007  ,IGKC*01(4)           ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67010  ,IGKC*01(7)           ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67012  ,IGKC*01(2)           ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67002  ,IGKC*02(1)           ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67008  ,IGKC*02(5)           ... ... --- --- --- XXX --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67009  ,IGKC*02(6)           ... ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67011  ,IGKC*03(8)           ... ... --T --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

                                ________________                                                _EF_____        
                               85.4    85.2                                                    96.1            
                                   85.3    85.1  85  86  87  88  89  90  91  92  93  94  95  96    96.2  97  98
                                 S   T   Y   S   M   S   S   T   L   T   L   T   K   D   E   Y           E   R 
  V00807  ,IGKC*01              AGC ACC TAC AGC ATG AGC AGC ACC CTC ACG TTG ACC AAG GAC GAG TAT ... ... GAA CGA

  V00777  ,IGKC*01              --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  V01569  ,IGKC*01              --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67003  ,IGKC*01              --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67004  ,IGKC*01(2)           --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67005  ,IGKC*01(2)           --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67006  ,IGKC*01(3)           --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67007  ,IGKC*01(4)           --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67010  ,IGKC*01(7)           --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67012  ,IGKC*01(2)           --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67002  ,IGKC*02(1)           --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67008  ,IGKC*02(5)           --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67009  ,IGKC*02(6)           --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---

  X67011  ,IGKC*03(8)           --- --- --- --- --- --- --- --- --- --A --- --- --- --- --- --- --- --- --- ---


                                                        _______________________FG___________________________    
                                                                                                               
                                 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118
                                 H   N   S   Y   T   C   E   A   T   H   K   T           S   T   S   P   I   V 
  V00807  ,IGKC*01              CAT AAC AGC TAT ACC TGT GAG GCC ACT CAC AAG ACA ... ... TCA ACT TCA CCC ATT GTC

  V00777  ,IGKC*01              --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- --- --- --- --- --- 

  V01569  ,IGKC*01              --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- --- --- --- --- --- 

  X67003  ,IGKC*01              --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- --- --- --- --- --- 

  X67004  ,IGKC*01(2)           --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- --- --- --- --- --- 

  X67005  ,IGKC*01(2)           --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- --- --- --- --- --- 

  X67006  ,IGKC*01(3)           --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- --- --- --- --- --- 

  X67007  ,IGKC*01(4)           --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- --- --- --- --- --- 

  X67010  ,IGKC*01(7)           --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- --- --- --- --- --- 

  X67012  ,IGKC*01(2)           --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- --- --- --- --- --- 

  X67002  ,IGKC*02(1)           --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- --- --- --- --C --- 

  X67008  ,IGKC*02(5)           --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- --- --- --- --C --- 

  X67009  ,IGKC*02(6)           --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- --- --- --- --C --- 

  X67011  ,IGKC*03(8)           --- --- --- --- --- --- --- --- --- --- --- --- ... ... --- --- --- --- --C --- 

                                                               
                                119 120 121 122 123 124 125 126
                                 K   S   F   N   R   N   E   C   *
  V00807  ,IGKC*01              AAG AGC TTC AAC AGG AAT GAG TGT 

  V00777  ,IGKC*01              --- --- --- --- --- --- --- ---

  V01569  ,IGKC*01              --- --- --- --- --- --- --- ---

  X67003  ,IGKC*01              --- --- --- --- --- --- --- --- 

  X67004  ,IGKC*01(2)           --- --- --- --- --- --- --- --- 

  X67005  ,IGKC*01(2)           --- --- --- --- --- --- --- --- 

  X67006  ,IGKC*01(3)           --- --- --- --- --- --- --- ---

  X67007  ,IGKC*01(4)           --- --- --- --- --- --- --- ---

  X67010  ,IGKC*01(7)           --- --- --- --- --- --- --- --- 

  X67012  ,IGKC*01(2)           --- --- --- --- --- --- --- ---

  X67002  ,IGKC*02(1)           --- --- --- --- --- --- --- ---

  X67008  ,IGKC*02(5)           --- --- --- --- --- --- --- -X-

  X67009  ,IGKC*02(6)           --- --- --- --- --- --- --- ---

  X67011  ,IGKC*03(8)           --- --- --- --- --- --- --- ---

Mouse (Mus saxicola) IGKC

                                                                                                               
                                                    1.4 1.3 1.2 1.1   1   2   3   4   5   6   7   8   9  10  11
                                                     G   A   D   V   A   P   T   A   S   I   F   P   P   S   S 
  M21792  ,IGKC*01                                (G)GG GCT GAT GTT GCA CCA ACT GCA TCC ATC TTC CCA CCA TCC AGT

                                                ___AB_______                                            ________
                                               15.1    15.3                                                    
                                 12  13  14  15    15.2      16  17  18  19  20  21  22  23  24  25  26  27  28
                                 E   Q   L   A               S   G   G   A   S   V   V   C   F   M   N   N   F 
  M21792  ,IGKC*01              GAG CAG TTA GCA ... ... ... TCT GGA GGT GCC TCA GTC GTG TGC TTC ATG AAC AAC TTC

                                _________BC_____________________                            ___________CD_______
                                                                                           45.1    45.3    45.5
                                 29  30  31  32  33  34  35  36  39  40  41  42  43  44  45    45.2    45.4    
                                 Y   P           K   D   I   S   V   K   W   K   V   D   G   S   E   R   Q   D 
  M21792  ,IGKC*01              TAC CCC ... ... AAA GAC ATC AGT GTC AAG TGG AAG GTT GAT GGC AGT GAA CGA CAA GAT

                                ________                                _________________________DE_____________
                                   45.7                                84.1    84.3    84.5    84.7    85.6    
                               45.6      77  78  79  80  81  82  83  84    84.2    84.4    84.6    85.7    85.5
                                         G   F   L   N   S   W   T   E   Q   D   S   K   D                     
  M21792  ,IGKC*01              ... ... GGC TTC CTG AAC AGT TGG ACT GAA CAG GAC AGC AAA GAC ... ... ... ... ...

                                ________________                                                _EF_____        
                               85.4    85.2                                                    96.1            
                                   85.3    85.1  85  86  87  88  89  90  91  92  93  94  95  96    96.2  97  98
                                 S   T   Y   S   M   S   S   T   L   T   L   T   K   D   E   Y           E   R 
  M21792  ,IGKC*01              AGC ACC TAC AGC ATG AGC AGC ACC CTC ACA TTG ACC AAG GAT GAG TAT ... ... GAA CGA

                                                        _______________________FG___________________________    
                                                                                                               
                                 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118
                                 H   N   S   Y   T   C   E   A   T   H   K   T           S   S   S   P   I   V 
  M21792  ,IGKC*01              CAT AAC AGC TAT ACC TGT GAG GCC ACT CAT AAG ACG ... ... TCA TCT TCA CCC ATC GTC

                                                               
                                119 120 121 122 123 124 125 126
                                 K   S   F   N   R   N   E   C   *
  M21792  ,IGKC*01              AAG AGC TTC AAC AGG AAT GAG TGT 

Mouse (Mus pahari) IGKC


                                                                                                              
                                                    1.4 1.3 1.2 1.1   1   2   3   4   5   6   7   8   9  10  11
                                                     G   A   D   V   A   P   T   A   S   I   F   P   P   S   N 
  M21793  ,IGKC*01                                (G)GG GCT GAT GTT GCA CCA ACT GCA TCC ATC TTC CCA CCA TCC AAT

                                                ___AB_______                                            ________
                                               15.1    15.3                                                    
                                 12  13  14  15    15.2      16  17  18  19  20  21  22  23  24  25  26  27  28
                                 E   Q   L   A               S   G   G   A   S   I   V   C   F   L   N   N   F 
  M21793  ,IGKC*01              GAG CAG TTA GCA ... ... ... TCT GGA GGT GCC TCA ATC GTG TGT TTC CTG AAC AAC TTC

                                _________BC_____________________                            ___________CD_______
                                                                                           45.1    45.3    45.5
                                 29  30  31  32  33  34  35  36  39  40  41  42  43  44  45    45.2    45.4    
                                 Y   P           R   D   I   N   V   K   W   K   V   D   G   S   E   K   Q   D 
  M21793  ,IGKC*01              TAC CCC ... ... AGA GAC ATC AAT GTC AAG TGG AAG GTT GAT GGC AGT GAA AAA CAA GAT

                                ________                                _________________________DE_____________
                                   45.7                                84.1    84.3    84.5    84.7    85.6    
                               45.6      77  78  79  80  81  82  83  84    84.2    84.4    84.6    85.7    85.5
                                         G   V   L   N   S   W   T   E   Q   D   S   K   D                     
  M21793  ,IGKC*01              ... ... GGC GTC CTG AAC AGT TGG ACT GAA CAG GAC AGC AAG GAC ... ... ... ... ...

                                ________________                                                _EF_____        
                               85.4    85.2                                                    96.1            
                                   85.3    85.1  85  86  87  88  89  90  91  92  93  94  95  96    96.2  97  98
                                 S   T   Y   S   M   S   S   T   L   T   L   T   K   A   E   Y           E   Q 
  M21793  ,IGKC*01              AGC ACC TAC AGC ATG AGC AGC ACC CTC ACA TTG ACC AAG GCA GAG TAT ... ... GAA CAA

                                                        _______________________FG___________________________    
                                                                                                               
                                 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118
                                 H   N   S   Y   T   C   E   A   V   H   K   T           S   S   S   P   I   V 
  M21793  ,IGKC*01              CAT AAC AGC TAT ACC TGT GAG GCC GTT CAT AAA ACA ... ... TCA AGT TCA CCC ATC GTC

                                                               
                                119 120 121 122 123 124 125 126
                                 K   S   F   N   R   N   E   C   *
  M21793  ,IGKC*01              AAG AGC TTC AAC AGG AAT GAG TGT 

Mouse (Mus minutoides) IGKC

 
                                                                                                              
                                                    1.4 1.3 1.2 1.1   1   2   3   4   5   6   7   8   9  10  11
                                                     G   S   D   V   A   P   T   A   S   I   F   P   P   S   S 
  M21794  ,IGKC*01                                (G)GG TCT GAT GTT GCA CCA ACT GCA TCC ATC TTC CCG CCA TCC AGT

                                                ___AB_______                                            ________
                                               15.1    15.3                                                    
                                 12  13  14  15    15.2      16  17  18  19  20  21  22  23  24  25  26  27  28
                                 E   Q   L   A               S   G   G   A   S   V   V   C   F   M   N   N   F 
  M21794  ,IGKC*01              GAG CAG TTA GCA ... ... ... TCT GGA GGT GCC TCA GTC GTG TGC TTC ATG AAC AAC TTC

                                _________BC_____________________                            ___________CD_______
                                                                                           45.1    45.3    45.5
                                 29  30  31  32  33  34  35  36  39  40  41  42  43  44  45    45.2    45.4    
                                 Y   P           R   D   I   N   V   K   W   K   I   D   G   N   E   R   R   D 
  M21794  ,IGKC*01              TAC CCC ... ... AGA GAC ATC AAT GTC AAG TGG AAG ATT GAT GGC AAT GAA CGT CGA GAT

                                ________                                _________________________DE_____________
                                   45.7                                84.1    84.3    84.5    84.7    85.6    
                               45.6      77  78  79  80  81  82  83  84    84.2    84.4    84.6    85.7    85.5
                                         G   I   L   T   S   Y   T   D   Q   D   S   K   D                     
  M21794  ,IGKC*01              ... ... GGC ATC CTG ACC AGT TAT ACT GAT CAG GAC AGC AAA GAC ... ... ... ... ...

                                ________________                                                _EF_____        
                               85.4    85.2                                                    96.1            
                                   85.3    85.1  85  86  87  88  89  90  91  92  93  94  95  96    96.2  97  98
                                 S   T   Y   S   L   S   S   T   L   T   L   T   K   D   E   Y           E   R 
  M21794  ,IGKC*01              AGC ACC TAC AGC TTG AGC AGC ACC CTC ACA TTG ACC AAG GAC GAG TAT ... ... GAA CGA

                                                        _______________________FG___________________________    
                                                                                                               
                                 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118
                                 H   N   S   Y   T   C   E   A   T   H   K   T           S   T   S   P   I   V 
  M21794  ,IGKC*01              CAT AAC AGC TAT ACC TGT GAG GCC ACT CAC AAG ACG ... ... TCA ACT TCG CCC ATC GTC

                                                               
                                119 120 121 122 123 124 125 126
                                 K   S   F   N   R   N   E   C   *
  M21794  ,IGKC*01              AAG AGC TTC AAC AGG AAT GAG TGT 

Mouse (Mus cookii) IGKC

                                                                                                               
                                                    1.4 1.3 1.2 1.1   1   2   3   4   5   6   7   8   9  10  11
                                                     G   A   D   V   A   P   T   V   S   I   F   P   P   S   S 
  M21795  ,IGKC*01                                (G)GG GCT GAT GTT GCA CCA ACT GTA TCC ATC TTC CCA CCA TCC AGT

                                                ___AB_______                                            ________
                                               15.1    15.3                                                    
                                 12  13  14  15    15.2      16  17  18  19  20  21  22  23  24  25  26  27  28
                                 E   Q   L   T               S   G   G   A   S   V   V   C   F   M   N   N   F 
  M21795  ,IGKC*01              GAG CAG TTA ACA ... ... ... TCT GGA GGT GCC TCA GTC GTG TGC TTC ATG AAC AAC TTC

                                _________BC_____________________                            ___________CD_______
                                                                                           45.1    45.3    45.5
                                 29  30  31  32  33  34  35  36  39  40  41  42  43  44  45    45.2    45.4    
                                 Y   P           R   D   I   N   V   K   W   K   I   D   G   S   E   R   Q   G 
  M21795  ,IGKC*01              TAC CCC ... ... AGA GAC ATT AAT GTC AAG TGG AAG ATT GAT GGC AGT GAA CGA CAA GGT

                                ________                                _________________________DE_____________
                                   45.7                                84.1    84.3    84.5    84.7    85.6    
                               45.6      77  78  79  80  81  82  83  84    84.2    84.4    84.6    85.7    85.5
                                         G   V   L   N   S   W   T   D   Q   D   S   K   D                     
  M21795  ,IGKC*01              ... ... GGC GTC CTG AAC AGT TGG ACT GAT CAG GAC AGC AAA GAC ... ... ... ... ...

                                ________________                                                _EF_____        
                               85.4    85.2                                                    96.1            
                                   85.3    85.1  85  86  87  88  89  90  91  92  93  94  95  96    96.2  97  98
                                 S   T   Y   S   M   S   S   T   L   T   L   T   K   A   E   Y           E   Q 
  M21795  ,IGKC*01              AGC ACC TAC AGC ATG AGC AGC ACC CTC ACG TTG ACC AAG GCC GAG TAT ... ... GAA CAA

                                                        _______________________FG___________________________    
                                                                                                               
                                 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118
                                 H   N   S   Y   T   C   E   A   T   H   R   T           S   A   S   P   I   V 
  M21795  ,IGKC*01              CAT AAC AGC TAC ACC TGT GAG GCC ACT CAC AGG ACA ... ... TCA GCT TCA CCC ATC GTC

                                                               
                                119 120 121 122 123 124 125 126
                                 K   S   F   N   R   N   E   C   *
  M21795  ,IGKC*01              AAG AGC TTC AAC AGG AAT GAG TGT 

Mouse (Mus spretus) IGKC


                                                                                                               
                                                    1.4 1.3 1.2 1.1   1   2   3   4   5   6   7   8   9  10  11
                                                     G   A   D   A   A   P   T   V   S   I   F   P   P   S   S 
  M21796  ,IGKC*01                                (G)GG GCT GAT GCT GCA CCA ACA GTA TCC ATC TTC CCA CCA TCC AGT

                                                ___AB_______                                            ________
                                               15.1    15.3                                                    
                                 12  13  14  15    15.2      16  17  18  19  20  21  22  23  24  25  26  27  28
                                 E   Q   L   T               S   G   G   A   S   V   V   C   F   L   N   N   F 
  M21796  ,IGKC*01              GAG CAG TTA ACA ... ... ... TCT GGA GGT GCC TCA GTC GTG TGC TTC TTG AAC AAC TTC

                                _________BC_____________________                            ___________CD_______
                                                                                           45.1    45.3    45.5
                                 29  30  31  32  33  34  35  36  39  40  41  42  43  44  45    45.2    45.4    
                                 Y   P           R   D   I   N   V   K   W   K   I   D   G   S   E   R   Q   N 
  M21796  ,IGKC*01              TAC CCC ... ... AGA GAC ATC AAT GTC AAG TGG AAG ATT GAT GGC AGT GAA CGA CAA AAT

                                ________                                _________________________DE_____________
                                   45.7                                84.1    84.3    84.5    84.7    85.6    
                               45.6      77  78  79  80  81  82  83  84    84.2    84.4    84.6    85.7    85.5
                                         G   V   L   N   S   W   T   D   Q   D   S   K   D                     
  M21796  ,IGKC*01              ... ... GGT GTC CTG AAC AGT TGG ACT GAT CAG GAC AGC AAA GAC ... ... ... ... ...

                                ________________                                                _EF_____        
                               85.4    85.2                                                    96.1            
                                   85.3    85.1  85  86  87  88  89  90  91  92  93  94  95  96    96.2  97  98
                                 S   T   Y   S   M   S   S   T   L   T   L   T   K   D   E   Y           E   R 
  M21796  ,IGKC*01              AGC ACC TAC AGC ATG AGC AGC ACC CTC ACA TTG ACC AAG GAC GAG TAT ... ... GAA CGA

                                                        _______________________FG___________________________    
                                                                                                               
                                 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118
                                 H   N   S   Y   T   C   E   A   T   H   K   T           S   T   S   P   I   V 
  M21796  ,IGKC*01              CAT AAC AGC TAT ACC TGT GAG GCC ACT CAC AAG ACA ... ... TCA ACT TCA CCC ATT GTC

                                                               
                                119 120 121 122 123 124 125 126
                                 K   S   F   N   R   N   E   C   *
  M21796  ,IGKC*01              AAG AGC TTC AAC AGG AAT GAG TGT 


IMGT notes:
(1) The sequence described in the manuscript is different from the one submitted to the EMBL data library.We refer to the sequence published in the original manuscript. a78, t153, g229, c305 are missing in EMBL flat file (Position numbering according to the present EMBL sequence).
(2)The sequence described in the manuscript is different from the one submitted to the EMBL data library.We refer to the sequence published in the original manuscript. a75, t150, g226, c302, g378 are missing in EMBL flat file (Position numbering according to the present EMBL sequence).
(3)The sequence described in the manuscript is different from the one submitted to the EMBL data library.We refer to the sequence published in the original manuscript. a74, a150, a226, t302, a378 are missing in EMBL flat file (Position numbering according to the present EMBL sequence).
(4)The sequence described in the manuscript is different from the one submitted to the EMBL data library.We refer to the sequence published in the original manuscript. g75, c152, a227, t303 are missing in EMBL flat file (Position numbering according to the present EMBL sequence).
(5)Nucleotides X160, X161, X162, X320 in IGKC*02 from X67008 are unresolved nucleotides. The sequence described in the manuscript is different from the one submitted to the EMBL data library.We refer to the sequence published in the original manuscript. a75, a152, a227, c303 are missing in EMBL flat file and nucleotides 170 to 172 are unresolved (Position numbering according to the present EMBL sequence).
(6)Nucleotides X10, X107 in IGKC*02 from X67009 are unresolved nucleotides. The sequence described in the manuscript is different from the one submitted to the EMBL data library.We refer to the sequence published in the original manuscript. t74, g150, c226, a302 are missing in EMBL flat file (Position numbering according to the present EMBL sequence).
(7)The sequence described in the manuscript is different from the one submitted to the EMBL data library.We refer to the sequence published in the original manuscript. a74, a149, a226, t302, a378 are missing in EMBL flat file (Position numbering according to the present EMBL sequence).
(8)The sequence described in the manuscript is different from the one submitted to the EMBL data library.We refer to the sequence published in the original manuscript. a75, t150, g226, c302 are missing in EMBL flat file (Position numbering according to the present EMBL sequence).


This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001).


Created: Monday, 11-Jul-2011 12:56:58 CEST
Author: Delphine Guiraudou

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For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.

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