Table of alleles: Ma's night monkey (Aotus nancymaae) TRAV

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.

The IMGT allele table refers to the V-REGION polymorphism. It does not include polymorphisms in the other parts of the V-GENE. V-REGION alleles are only described for genes which have at least one Functional or ORF allele. The accession number of a reference sequence is given for each allele.
Nucleotide mutations and amino acid changes in CDR3-IMGT of rearranged sequences are not taken into account for the description of polymorphism.

Click on a gene name to get the alignment of the corresponding V-REGION alleles.
Click on an accession number to get the sequence and additional information (IMGT annotations, IMGT flat file, Coding regions...).

Ma's night monkey (Aotus nancymaae) TRAV subgroup names are according to the human TRAV subgroup names (Table of alleles: Human TRAV )

TRAV
subgroup
TRAV
gene name
Fct TRAV
allele name
Accession number confirmed
by genetics
and/or data
Description of mutations
TRAV5 TRAV5 (F) TRAV5*01 AF027543 +c86  ,S29  |t248  ,L83  |g291  |
(F) TRAV5*02 AF027547 +c86>t,S29>F|
(F) TRAV5*03 AF027549  c86>t,S29>F|            |g291>a|
(F) TRAV5*04 AF027554  c86>t,S29>F|t248>c,L83>S|
TRAV9 TRAV9S1 (F) TRAV9S1*01 AF027557   
TRAV12 TRAV12S1 (F) TRAV12S1*01 AF027561   
TRAV12S2 (F) TRAV12S2*01 AF027546+ a204  |
(F) TRAV12S2*02 AF027562  a204>g|
TRAV13 TRAV13S1 (F) TRAV13S1*01 AF027560+ a82  |a92  ,N31  |c93  |a147  |a204  |
(F) TRAV13S1*02 AF027548  a82>n|           |c93>n|a147>g|a204>g|
(F) TRAV13S1*03 AF027565       |a92>g,N31>S|
(F) TRAV13S1*04 AF027569                         |a147>g|
TRAV17 TRAV17 (F) TRAV17*01 AF027556 + 
TRAV19 TRAV19 (F) TRAV19*01 AF027550   
TRAV21 TRAV21 (F) TRAV21*01 AF027541+  
TRAV29 TRAV29 (F) TRAV29*01 AF027558   


Created: 26/03/2003
Author: Géraldine Folch

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