Table of alleles: Rainbow trout (Oncorhynchus mykiss) TRAV

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.

The IMGT allele table refers to the V-REGION polymorphism. It does not include polymorphisms in the other parts of the V-GENE. V-REGION alleles are only described for genes which have at least one Functional or ORF allele. The accession number of a reference sequence is given for each allele.
Nucleotide mutations and amino acid changes in CDR3-IMGT of rearranged sequences are not taken into account for the description of polymorphism.

Click on a gene name to get the alignment of the corresponding V-REGION alleles.
Click on an accession number to get the sequence and additional information (IMGT annotations, IMGT flat file, Coding regions...).

TRAV
subgroup
TRAV
gene name
Fct TRAV
allele name
Accession
number
Confirmed
by genetics
and/or data
Description of mutations
1 TRAV1S1 (F) TRAV1S1*01 U50918    
2 TRAV2S1 (F) TRAV2S1*01 U50917    
TRAV2S2 (F) TRAV2S2*01 U50916    
TRAV2S3 (F) TRAV2S3*01 U50919    
TRAV2S4 (F) TRAV2S4*01 U50991    
3 TRAV3S1 (F) TRAV3S1*01 U50920    
4 TRAV4S1 (F) TRAV4S1*01 U50988    
5 TRAV5S1 (F) TRAV5S1*01 U50989    
6 TRAV6S1 (F) TRAV6S1*01 U50990    


Created: 25/10/1999
Last updated: Monday, 20-Jan-2020 21:03:55 CET
Author: Géraldine Folch