Table of alleles: Chimpanzee (Pan troglodytes) IGHC

Functionality is shown between parentheses, (F) and (P), when the accession number refers to a cDNA sequence and the corresponding genomic gene has not yet been isolated.

Click on a gene name to get the alignment of the corresponding C-REGION alleles.
Click on an accession number to get the sequence and additional information (IMGT annotations, IMGT flat file, Coding regions...).

IGHC
gene name
Exons Fct IGHC
allele name
Accession numbers Confirmed
by
genetics
and or
data
Description of mutations
IGHA1 CH1 F IGHA1*01 X53702 +  
H F IGHA1*01 X53702 +  
CH2 F IGHA1*01 X53702 +  
CH3(including CHS) F IGHA1*01 X53702    
M          
IGHA2 CH1 F IGHA2*01 X53706 +  
H F IGHA2*01 X53706 +  
CH2 F IGHA2*01 X53706 +  
CH3(including CHS) F IGHA2*01 X53706    
M          
IGHE CH1 F IGHE*01 M15398    
CH2 F IGHE*01 M15398    
CH3 F IGHE*01 M15398    
CH4(including CHS) F IGHE*01 M15398    
M1          
M2          
IGHG1 CH1 (F) IGHG1*01 X65284   a252.2  |t315  |
F IGHG1*02 AF300437   a252.2>g|t315>c|
H (F) IGHG1*01 X65285   t27  |
F IGHG1*02 AF300437   t27>c|
CH2 (F) IGHG1*01 X61311   g66  |
F IGHG1*02 AF300437   g66>a|
CH3(including CHS) (F) IGHG1*01 X61310    
M1          
M2          
IGHG2 CH1 F IGHG2*01 AF300436    
H F IGHG2*01 AF300436    
CH2 F IGHG2*01 AF300436    
CH3(including CHS)          
M1          
M2          
IGHG3 CH1 F IGHG3*01 AF300434   a268  ,T90  |t308  ,I103  |a318  |g319  ,D107  |
IGHG3*02 AF300435   a268>g,T90>A|t308>c,I103>T|a318>g|g319>a,D107>N|
H1 F IGHG3*01 AF300434    
IGHG3*02 AF300435    
H2 F IGHG3*01 AF300434   t24  |c26  ,P9  |
IGHG3*02 AF300435   t24>c|c26>t,P9>L|
CH2 F IGHG3*01 AF300434   t39  |
IGHG3*02 AF300435   t39>c|
CH3(including CHS)          
M1          
M2          
IGHG4 CH1 F IGHG4*01 AF300432 +  
H F IGHG4*01 AF300432 +  
CH2 F IGHG4*01 AF300432 +  
CH3(including CHS)          
M1          
M2          
IGHGP CH1 F IGHGP*01 AF300430    
IGHGP*02 AF300431    
H F IGHGP*01 AF300430   g49  ,A17  |
IGHGP*02 AF300431   g49>c,A17>P|
CH2 F IGHGP*01 AF300430   t2.3  ,L1.3  |c4  ,P2  |
IGHGP*02 AF300431   t2.3>c,L1.3>P|c4>g,P2>A|
CH3(including CHS)          
M1          
M2          


Created: 12/11/2002
Author: Nathalie Bosc

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For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.

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