Table of alleles: Mouse ( Mus musculus) TRDJ

Print of this table: Bosc, N. et al., Exp. Clin. Immunogenet., 18, 51-58 (2001). PMID:11150853

IMGT numbering and description of alleles for germline J-REGIONs start with the first nucleotide of the first codon. The accession number of a reference sequence is given for each allele.

Click on a gene name to get the alignment of the corresponding J-REGION alleles.
Click on an accession number to get the sequence and additional information (IMGT annotations, IMGT flat file, Coding regions...).

TRDJ
gene name
Fct TRDJ
allele name
Strain Accession number Confirmed
by genetics
and/or data
Description of mutations
TRDJ1 F TRDJ1*01 BALB/c AF019412 +  
TRDJ2 F TRDJ2*01 BALB/c X64903 + t24     |
F(1) TRDJ2*02 Std:ddY X17179   t24>del#|

IMGT note:
(1) Nucleotide T, at position 24 (according to the IMGT allele mutation numbering) of TRDJ2 in X64903, is deleted in X17179. This DELETION leads to a frameshift downstream of codon 8. However it is not excluded that V-D-J rearrangements allow to reestablish the normal ORF (see alignment of alleles). For these reasons the TRDJ2*02 is considered as functional.


Created: 15/02/2000
Last updated: Friday, 17-Jan-2020 21:04:42 CET
Author: Nathalie Bosc