Table of alleles: Rat (Rattus norvegicus, Rattus rattus) IGHC

Click on a gene name to get the alignment of the corresponding C-REGION alleles.
Click on an accession number to get the sequence and additional information (IMGT annotations, IMGT flat file, Coding regions...).

Functionality is shown between parentheses, (F) and (P), when the accession number refers to a cDNA sequence and the corresponding genomic gene has not yet been isolated.

Norway rat (Rattus norvegicus)

IGHC
gene name
Exons Fct IGHC
allele name
Accession numbers Confirmed
by
genetics
and/or
data
Description of mutations
IGHA CH1          
H+CH2          
CH3(including CHS) F IGHA*01 M13801    
M          
IGHE CH1 F IGHE*01 K02901 +  
CH2 F IGHE*01 K02901 +  
CH3 F IGHE*01 K02901 +  
CH4(including CHS) F IGHE*01 K02901 +  
M1 F IGHE*01 K02901    
M2 F IGHE*01 K02901    
IGHG1 CH1 F IGHG1*01 M28670    
H F IGHG1*01 M28670    
CH2 F IGHG1*01 M28670    
CH3(including CHS) F IGHG1*01 M28670 +  
IGHG2A CH1 F IGHG2A*01 M28669    
H F IGHG2A*01 M28669    
CH2 F IGHG2A*01 M28669    
CH3(including CHS) F IGHG2A*01 M28669 +  
IGHG2B CH1 F IGHG2B*01 M28671    
H F IGHG2B*01 M28671    
CH2 F IGHG2B*01 M28671    
CH3(including CHS) F IGHG2B*01 M28671 +  
IGHM CH1 (F) IGHM*01 X68782    
CH2 (F) IGHM*01 X68312 + t350  ,F117  |g353  ,W118  |
F IGHM*02 M13800   t350>g,F117>C|g353>t,W118>L|
CH3 (F) IGHM*01 X68312    
CH4(including CHS) (F) IGHM*01 X68312    

Black rat (Rattus rattus)

IGHC
gene name
Exons Fct IGHC
allele name
Accession numbers Confirmed
by
genetics
and/or
data
Description of mutations
IGHG2C CH1 (F) IGHG2C*01 X07189    
H (F) IGHG2C*01 X07189    
CH2 (F) IGHG2C*01 X07189    
CH3(including CHS) (F) IGHG2C*01 X07189    


Created: 22/10/2002
Last updated: Friday, 03-Jun-2016 21:03:52 CEST
Author: Nathalie Bosc

Software material and data coming from IMGT server may be used for academic research only, provided that it is referred to IMGT®, and cited as "IMGT®, the international ImMunoGeneTics information system® http://www.imgt.org (founder and director: Marie-Paule Lefranc, Montpellier, France)." References to cite: Lefranc, M.-P. et al., Nucleic Acids Res., 27:209-212 (1999); doi: 10.1093/nar/27.1.209 Full text Cover; Ruiz, M. et al., Nucleic Acids Res., 28:219-221 (2000); doi: 10.1093/nar/28.1.219 Full text; Lefranc, M.-P., Nucleic Acids Res., 29:207-209 (2001); doi: 10.1093/nar/29.1.207 Full text; Lefranc, M.-P., Nucleic Acids Res., 31:307-310 (2003); doi: 10.1093/nar/gkg085 Full text; Lefranc, M.-P. et al., In Silico Biol., 5, 0006 (2004) [Epub], 5:45-60 (2005); Lefranc, M.-P. et al., Nucleic Acids Res., 33:D593-597 (2005); doi: 10.1093/nar/gki065 Full text; Lefranc, M.-P. et al., Nucleic Acids Res., 37:D1006-1012 (2009); doi: 10.1093/nar/gkn838 Full text; Lefranc, M.-P. et al., Nucleic Acids Res., 43:D413-422 (2015); doi: 10.1093/nar/gku1056 Full text.
For any other use please contact Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr.

CNRS Université de Montpellier European Commission
IMGT® Founder and Executive Director Emeritus:
Marie-Paule Lefranc Marie-Paule.Lefranc@igh.cnrs.fr
IMGT® Director:
Sofia Kossida Sofia.Kossida@igh.cnrs.fr
Bioinformatics manager:
Véronique Giudicelli Veronique.Giudicelli@igh.cnrs.fr
Computer manager:
Patrice Duroux Patrice.Duroux@igh.cnrs.fr
Webmaster:
Amélie Houles

Citing IMGT | Warranty disclaimer and copyright notice | Privacy policy and advertisement policy

© Copyright 1995-2017 IMGT®, the international ImMunoGeneTics information system®