Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT subgroup IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Accession numbers Positions in the sequence
(D-GENE-UNIT)
Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
(D-GENE-UNIT)
IGHD1 IGHD1 IGHD1*01 F 6 + + GU129139 [1] MAP 757536..757604
IGHD1D IGHD1D*01 F 3 + + GU129140 [1] MAP 956096..956164
IGHD1T2 IGHD1T2*01 F 6 + + GU129139 [1] MAP 333099..333187
IGHD1T2D IGHD1T2D*01 F 3 + + GU129140 [1] MAP 528703..528771
IGHD1T3D IGHD1T3D*01 F 3 + + GU129140 [1] MAP 833042..833109
IGHD1T4 IGHD1T4*01 F 6 GU129139 [1] MAP complement(661333..661421)
IGHD1T5 IGHD1T5*01 F 6 + + GU129139 [1] MAP 710801..710869
IGHD2 IGHD2 IGHD2*01 F 6 + + GU129139 [1] MAP 758408..758476
IGHD2D IGHD2D*01 F 3 GU129140 [1] MAP 956554..956622
IGHD2T2 IGHD2T2*01 F 6 + + GU129139 [1] MAP 333562..333633
IGHD2T2D IGHD2T2D*01 F 3 + + GU129140 [1] MAP 529104..529174
IGHD2T3D IGHD2T3D*01 F 3 GU129140 [1] MAP 832409..832477
IGHD2T4 IGHD2T4*01 F 6 GU129139 [1] MAP complement(660887..660958)
IGHD3 IGHD3 IGHD3*01 F 6 GU129139 [1] MAP 758849..758916
IGHD3D IGHD3D*01 F 3 GU129140 [1] MAP 956997..957064
IGHD3T3D IGHD3T3D*01 F 3 GU129140 [1] MAP 831958..832023
IGHD3T4 IGHD3T4*01 F 6 + + GU129139 [1] MAP complement(647978..648046)
IGHD4 IGHD4 IGHD4*01 F 6 + + GU129139 [1] MAP 759635..759702
IGHD4D IGHD4D*01 F 3 GU129140 [1] MAP 957786..957853
IGHD4T4 IGHD4T4*01 F 6 + + GU129139 [1] MAP complement(647571..647639)
IGHD5 IGHD5 IGHD5*01 F 6 + + GU129139 [1] MAP 760074..760142
IGHD5D IGHD5D*01 F 3 + + GU129140 [1] MAP 958189..958256
IGHD5T4 IGHD5T4*01 F 6 + + GU129139 [1] MAP complement(645722..645789)
IGHD6 IGHD6 IGHD6*01 F 6 + + GU129139 [1] MAP 760688..760755
IGHD6D IGHD6D*01 F 3 GU129140 [1] MAP 958724..958791
IGHD7 IGHD7 IGHD7*01 F 6 GU129139 [1] MAP 779189..779256
IGHD8 IGHD8 IGHD8*01 F 6 + + GU129139 [1] MAP 779950..780017
IGHD9 IGHD9 IGHD9*01 F 6 GU129139 [1] MAP 780469..780536

MAP: Mapped reference sequences.

IMGT references:
  1. [1] Yasuike M. et al. BMC Genomics 11:486-486 (2010). doi: 10.1186/1471-2164-11-486. PMID: 20813058
Created:
10/01/2019
Last updated:
07/06/2019
Authors:
Saida Hadi-Saljoqi
Editors:
Chantal Ginestoux