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"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
IGLJ1 IGLJ1*01 ORF (1) 17 San Clemente IMGT000033 [1] MAP 565301..565366
IGLJ2 IGLJ2*01 F 17 San Clemente IMGT000033 [1] MAP 570330..570395

MAP: Mapped reference sequences.

IMGT notes:
  1. (1) noncanonical J-MOTIF: LGXG instead of FGXG.
IMGT references:
  1. [1] Schwartz J.C. et al. Immunogenetics 2018 May;70(5):317-326. doi: 10.1007/s00251-017-1033-3. Epub 2017 Oct 23. Free PMC Article. PMID: 29063126
Created:
25/06/2019
Last updated:
12/07/2019
Authors:
Morgane Bertignac
Editors:
Chantal Ginestoux