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"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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See Correspondence between nomenclatures: Teleostei IGIC.

IMGT gene name IMGT allele name Fct R T Pr Positions in the locus IMGT/LIGM-DB reference sequences IMGT/LIGM-DB sequences from the literature
Strain Clone names Accession numbers Positions in the sequence Secondary accession numbers Strain Clone names Accession numbers Positions in the sequence
IGIJ1S1 IGIJ1S1*01 F LPG16 AY165791 [3] PG1 L25530 [1] c (st)
IGIJ1S2 IGIJ1S2*01 F PG2 L25531 [1] c (st)
IGIJ1S3 IGIJ1S3*01 F LPG15 AY165787 [3]
IGIJ1S4 IGIJ1S4*01 P (1) LPG16 AY165791 [3]
IGIJ1S5 IGIJ1S5*01 P (1) LPG15 AY165787 [3]
IGIJ2S1 IGIJ2S1*01 F FW15 U25699 [2] c (st)
IGIJ2S2 IGIJ2S2*01 F FWS2 U25700 [2] c (st) FWS26 U25702 [2] c (st)
IGIJ2S3 IGIJ2S3*01 F FWS20 U25701 [2] c (st)

c: cDNA sequence.
(st): sterile transcript.

IMGT notes:
  1. (1) Pseudogene because no conserved Phe(or Trp)-Gly-X-Gly motif.
IMGT references:
  1. [1] Ghaffari S.H. and Lobb C.J., J. Immunol., 151, 6900-6912 (1993). PMID: 8258698
  2. [2] Ghaffari S.H. and Lobb C.J., J. Immunol., 159, 250-258 (1997). PMID: 9200461
  3. [3] Jones J.C. et al., Unpublished (2003).
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