Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT subgroup IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Accession numbers Positions in the sequence
(L-V-GENE-UNIT)
Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
(L-V-GENE-UNIT)
TRGV2 TRGV2-1 TRGV2-1*01 F A2 Abyssinian IMGT000036 MAP 10089..10571
TRGV2-2 TRGV2-2*01 F A2 + + Abyssinian IMGT000036 MAP 59013..59497
TRGV2-3 TRGV2-3*01 F A2 + + Abyssinian IMGT000036 MAP 99610..100085
TRGV2-4 TRGV2-4*01 F A2 + + Abyssinian IMGT000036 MAP 254748..255232
TRGV5 TRGV5-1 TRGV5-1*01 P (1) A2 Abyssinian IMGT000036 MAP 112403..112707 (6)
TRGV5-2 TRGV5-2*01 P (2) A2 Abyssinian IMGT000036 MAP complement(176968..177624)
TRGV5-3 TRGV5-3*01 F A2 + + Abyssinian IMGT000036 MAP complement(224778..225438)
TRGV5-4 TRGV5-4*01 P (3) A2 Abyssinian IMGT000036 MAP 268362..268668 (6)
TRGV6 TRGV6-1 TRGV6-1*01 P (4) A2 Abyssinian IMGT000036 MAP complement(243613..243912) (6)
TRGV7 TRGV7-1 TRGV7-1*01 F A2 Abyssinian IMGT000036 MAP complement(232245..232748)
TRGVA TRGVA TRGVA*01 P (1) A2 Abyssinian IMGT000036 MAP 115155..115442 (6)
TRGVB TRGVB TRGVB*01 P (5) A2 Abyssinian IMGT000036 MAP complement(174614..174875) (6)

MAP: Mapped reference sequences.

IMGT notes:
  1. (1) frameshifts in V-REGION: several insertions and deletions, No L-PART1, No L-PART2.
  2. (2) frameshift in L-PART1, frameshifts in V-REGION: several insertions and deletions.
  3. (3) frameshift in V-REGION: several insertions and deletions, No L-PART2.
  4. (4) several STOP-CODON in V-REGION: positions 55 and 63, no V-RS.
  5. (5) frameshifts in V-REGION: several insertions and deletions, No V-RS, No -L-PART1.
  6. (6) Positions of V-REGION.
Created:
19/02/2019
Last updated:
19/03/2019
Authors:
Géraldine Folch
Editors:
Chantal Ginestoux