Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT subgroup IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Isolate Clone names Accession numbers Positions in the sequence
(D-GENE-UNIT)
Secondary accession numbers Isolate Clone names Accession numbers Positions in the sequence
(D-GENE-UNIT)
IGHD0 IGHD01 IGHD01*01 F 13 Swanson IMGT000043 MAP 120053..120141
IGHD01D IGHD01D*01 P (1) 12 Swanson IMGT000044 MAP 70767..70779 (4)
IGHD02D IGHD02D*01 F 12 Swanson IMGT000044 MAP 92110..92178
IGHD03D IGHD03D*01 F 12 Swanson IMGT000044 MAP 96070..96138
IGHD04D IGHD04D*01 P (1) 12 Swanson IMGT000044 MAP 142309..142321 (4)
IGHD05D IGHD05D*01 F 12 Swanson IMGT000044 MAP 160752..160820
IGHD06D IGHD06D*01 F 12 Swanson IMGT000044 MAP 165057..165125
IGHD07D IGHD07D*01 F 12 Swanson IMGT000044 MAP 313615..313683
IGHD08D IGHD08D*01 F 12 Swanson IMGT000044 MAP 316686..316754
IGHD1 IGHD1 IGHD1*01 F 13 Swanson IMGT000043 MAP 328026..328094
IGHD1*02 F 13 AY872256 [1] (5) 73882..73950
IGHD1D IGHD1D*01 F 12 Swanson IMGT000044 MAP 461573..461641
IGHD1T1 IGHD1T1*01 F 13 Swanson IMGT000043 MAP 215908..215976
IGHD1T1D IGHD1T1D*01 F 12 Swanson IMGT000044 MAP 375106..375174
IGHD1T2 IGHD1T2*01 F 13 Swanson IMGT000043 MAP 270058..270150
IGHD1T2*02 F 13 AY872256 [1] (5) 29270..29362
IGHD2 IGHD2 IGHD2*01 F 13 Swanson IMGT000043 MAP 328477..328546 AY872256 [1] (5) 74333..74402
IGHD2D IGHD2D*01 F 12 Swanson IMGT000044 MAP 462028..462096
IGHD2T1 IGHD2T1*01 F 13 Swanson IMGT000043 MAP 216179..216249
IGHD2T1D IGHD2T1D*01 F 12 Swanson IMGT000044 MAP 375520..375590
IGHD2T2 IGHD2T2*01 F 13 Swanson IMGT000043 MAP 270475..270545 AY872256 [1] (5) 30321..30391
IGHD3 IGHD3 IGHD3*01 F 13 Swanson IMGT000043 MAP 328919..328986 AY872256 [1] (5) 74775..74842
IGHD3D IGHD3D*01 F 12 Swanson IMGT000044 MAP 462454..462521
IGHD3T1 IGHD3T1*01 F 13 Swanson IMGT000043 MAP 223070..223138
IGHD3T2 IGHD3T2*01 ORF (3) 13 AY872256 [1] (5) 30047..30115
IGHD3T1D IGHD3T1D*01 ORF (2) 12 Swanson IMGT000044 381983..382051
IGHD4 IGHD4 IGHD4*01 F 13 Swanson IMGT000044 MAP 329706..329773 AY872256 [1] (5) 75562..75629
IGHD4D IGHD4D*01 F 12 Swanson IMGT000044 MAP 463241..463308
IGHD4T1D IGHD4T1D*01 F 12 Swanson IMGT000044 MAP 382621..382688
IGHD5 IGHD5 IGHD5*01 F 13 Swanson IMGT000043 MAP 330148..330215 AY872256 [1] (5) 76004..76071
IGHD5D IGHD5D*01 F 12 Swanson IMGT000044 MAP 463685..463752
IGHD5T1D IGHD5T1D*01 ORF (3) 12 Swanson IMGT000044 MAP 383392..383460
IGHD6 IGHD6 IGHD6*01 F 13 Swanson IMGT000043 MAP 330603..330670 AY872256 [1] (5) 76459..76526
IGHD6D IGHD6D*01 F 12 Swanson IMGT000044 MAP 464138..464205
IMGT notes:
  1. (1) no 5'D-NONAMER
  2. (2) noncanonicall 5'D-NONAMER: gggagttgt instead of ggtttttgt
  3. (3) noncanonical 3'D-NONAMER: tctctaaca instead of acaaaaacc
  4. (4) Positions of D-REGION
  5. (5) Sequence not in locus reference sequences (IMGT000043 and IMGT000044)
IMGT references:
  1. [1] Hansen J.D. et al., Proc. Natl. Acad. Sci. U.S.A., 102, 6919-6924 (2005). PMID: 15863615
Created:
16/09/2019
Last updated:
17/01/2020
Authors:
Saida Hadi-Saljoqi and Marie-Paule Lefranc
Editors:
Chantal Ginestoux, Saida Hadi-Saljoqi and Marie-Paule Lefranc