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"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Isolate Clone names Accession numbers Positions in the sequence
(C-GENE-UNIT)
Secondary accession numbers Isolate Clone names Accession numbers Positions in the sequence
(C-GENE-UNIT)
IGLC1 IGLC1*01 F 10 + + 17573 CM000296.1 NW_001095158 [1] 2769489..2769808 AG07107 CM014345.1 IMGT000062 MAP 1257282..1257601
IGLC2 IGLC2*01 F (1) 10 17573 CM000296.1 NW_001095158 [1] (5) 2775188..>2775380 (2)
IGLC2*02 F 10 + + AG07107 CM014345.1 IMGT000062 MAP 1262910..1263229
IGLC2A IGLC2A*01 F 10 AG07107 CM014345.1 IMGT000062 MAP 1268518..1268837
IGLC3 IGLC3*01 F 10 17573 CM000296.1 NW_001095158 [1] 2788888..2789207 AG07107 CM014345.1 IMGT000062 MAP 1273843..1274162
IGLC4 IGLC4*01 P (3) 10 17573 CM000296.1 NW_001095158 [1] (5) 2793605..2793898
IGLC4*02 P (3) 10 AG07107 CM014345.1 IMGT000062 MAP 1278561..1278854
IGLC5 IGLC5*01 P (4) 10 17573 CM000296.1 NW_001095158 [1] (5) 2798426..2798742
IGLC5*02 P (4) 10 AG07107 CM014345.1 IMGT000062 MAP 1283403..1283719
IGLC6 IGLC6*01 F 10 17573 CM000296.1 NW_001095158 [1] (5) 2802315..2802634
IGLC6*02 F 10 AG07107 CM014345.1 IMGT000062 MAP 1287291..1287610
IGLC7 IGLC7*01 F 10 AG07107 CM014345.1 IMGT000062 MAP 1290395..1290714
IGLC7*02 F 10 17573 CM000296.1, IGLC7S*01 NW_001095158 [1] (5) 2805239..2805558

MAP: Mapped reference sequences.

IMGT notes:
  1. (1) functionality defined for the available sequence of the gene, by homology with allele IGLC2*02 (IMGT000062)
  2. (2) position of C-REGION
  3. (3) STOP-CODON in C-REGION and frameshift in C-REGION
  4. (4) STOP-CODON in C-REGION
  5. (5) Sequence not in locus reference sequence (assembly Mmul_10)
IMGT references:
  1. [1] Gibbs R.A. et al., Science, 316, 222-234 (2007). PMID: 17431167
Created:
25/09/2014
Last updated:
23/04/2021
Authors:
Viviane Nguefack Ngoune, Emilie Carillon, Gérard Lefranc, Marie-Paule Lefranc and Sofia Kossida