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"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct R T Pr Chromosomal localization IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Strain Clone names Accession numbers Positions in the sequence (J-GENE-UNIT) Secondary accession numbers Strain Clone names Accession numbers Positions in the sequence (J-GENE-UNIT)
TRAJ1 TRAJ1*01 ORF (1) 2 Tuebingen NW_003334160 [1] MAP 1516196..1516285 DKEY-161L11 BX681417 [3] complement(30564..30653)
TRAJ2 TRAJ2*01 F 2 Tuebingen NW_003334160 [1] MAP 1517843..1517933 DKEY-161L11 BX681417 [3] complement(28916..29006)
TRAJ3 TRAJ3*01 ORF (2) 2 Tuebingen NW_003334160 [1] MAP 1518666..1518753 DKEY-161L11 BX681417 [3] complement(28096..28183))
TRAJ4 TRAJ4*01 F 2 Tuebingen NW_003334160 [1] MAP 1519354..1519445 DKEY-161L11 BX681417 [3] complement(27404..27495)
TRAJ5 TRAJ5*01 ORF (2) 2 Tuebingen NW_003334160 [1] MAP 1519923..1520009 DKEY-161L11 BX681417 [3] complement(26840..26926)
TRAJ6 TRAJ6*01 F 2 Tuebingen NW_003334160 [1] MAP 1520688..1520778 DKEY-161L11 BX681417 [3] complement(26071..26161)
TRAJ7 TRAJ7*01 F 2 Tuebingen NW_003334160 [1] MAP 1522145..1522235 DKEY-161L11 BX681417 [3] complement(24614..24704)
TRAJ8 TRAJ8*01 F 2 Tuebingen NW_003334160 [1] MAP 1522403..1522493 DKEY-161L11 BX681417 [3] complement(24356..24446)
TRAJ9 TRAJ9*01 F 2 Tuebingen NW_003334160 [1] MAP 1523317..1523408 DKEY-161L11 BX681417 [3] complement(23441..23532)
TRAJ10 TRAJ10*01 F 2 Tuebingen NW_003334160 [1] MAP 1523700..1523790 DKEY-161L11 BX681417 [3] complement(23059..23149)
TRAJ11 TRAJ11*01 F 2 Tuebingen NW_003334160 [1] MAP 1523999..1524089 DKEY-161L11 BX681417 [3] complement(22760..22850)
TRAJ12 TRAJ12*01 F 2 Tuebingen NW_003334160 [1] MAP 1524546..1524636 DKEY-161L11 BX681417 [3] complement(22213..22303)
TRAJ13 TRAJ13*01 F 2 Tuebingen NW_003334160 [1] MAP 1524792..1524882 DKEY-161L11 BX681417 [3] complement(21967..22057)
TRAJ14 TRAJ14*01 F + + 2 Tuebingen NW_003334160 [1] MAP 1525253..1525344 DKEY-161L11 BX681417 [3] complement(21505..21596)
TRAJ15 TRAJ15*01 F 2 Tuebingen NW_003334160 [1] MAP 1525869..1525959 DKEY-161L11 BX681417 [3] complement(20890..20980)
TRAJ16 TRAJ16*01 F 2 Tuebingen NW_003334160 [1] MAP 1526099..1526189 DKEY-161L11 BX681417 [3] complement(20660..20750)
TRAJ17 TRAJ17*01 F 2 Tuebingen NW_003334160 [1] MAP 1526509..1526600 DKEY-161L11 BX681417 [3] complement(20249..20340)
TRAJ18 TRAJ18*01 F 2 Tuebingen NW_003334160 [1] MAP 1527130..1527220 DKEY-161L11 BX681417 [3] complement(19629..19719)
TRAJ19 TRAJ19*01 F 2 Tuebingen NW_003334160 [1] MAP 1527414..1527504 DKEY-161L11 BX681417 [3] complement(19345..19435)
TRAJ20 TRAJ20*01 F 2 Tuebingen NW_003334160 [1] MAP 1527729..1527820 DKEY-161L11 BX681417 [3] complement(19029..19120)
TRAJ21 TRAJ21*01 F 2 Tuebingen NW_003334160 [1] MAP 1528009..1528099 DKEY-161L11 BX681417 [3] complement(18750..18840)
TRAJ22 TRAJ22*01 F 2 Tuebingen NW_003334160 [1] MAP 1528768..1528858 DKEY-161L11 BX681417 [3] complement(17991..18081)
TRAJ23 TRAJ23*01 F 2 Tuebingen NW_003334160 [1] MAP 1529223..1529310 DKEY-161L11 BX681417 [3] complement(17539..17626)
TRAJ24 TRAJ24*01 F 2 Tuebingen NW_003334160 [1] MAP 1529513..1529603 DKEY-161L11 BX681417 [3] complement(17246..17336)
TRAJ25 TRAJ25*01 F 2 Tuebingen NW_003334160 [1] MAP 1529786..1529877 DKEY-161L11 BX681417 [3] complement(16972..17063)
TRAJ26 TRAJ26*01 F 2 Tuebingen NW_003334160 [1] MAP 1530123..1530213 DKEY-161L11 BX681417 [3] complement(16636..16726)
TRAJ27 TRAJ27*01 F 2 Tuebingen NW_003334160 [1] MAP 1530312..1530402 DKEY-161L11 BX681417 [3] complement(16447..16537)
TRAJ28 TRAJ28*01 F 2 Tuebingen NW_003334160 [1] MAP 1530947..1531037 DKEY-161L11 BX681417 [3] complement(15812..15902)
TRAJ29 TRAJ29*01 F 2 Tuebingen NW_003334160 [1] MAP 1531532..1531623 DKEY-161L11 BX681417 [3] complement(15226..15317)
TRAJ30 TRAJ30*01 F 2 Tuebingen NW_003334160 [1] MAP 1532098..1532189 DKEY-161L11 BX681417 [3] complement(14660..14751)
TRAJ31 TRAJ31*01 F 2 Tuebingen NW_003334160 [1] MAP 1532427..1532517 DKEY-161L11 BX681417 [3] complement(14332..14422)
TRAJ32 TRAJ32*01 F 2 Tuebingen NW_003334160 [1] MAP 1532824..1532908 DKEY-161L11 BX681417 [3] complement(13941..14025)
TRAJ33 TRAJ33*01 F 2 Tuebingen NW_003334160 [1] MAP 1533213..1533303 DKEY-161L11 BX681417 [3] complement(13546..13636)
TRAJ34 TRAJ34*01 F 2 Tuebingen NW_003334160 [1] MAP 1533590..1533681 DKEY-161L11 BX681417 [3] complement(13168..13259)
TRAJ35 TRAJ35*01 F 2 Tuebingen NW_003334160 [1] MAP 1534204..1534293 DKEY-161L11 BX681417 [3] complement(12556..12645)
TRAJ36 TRAJ36*01 F 2 Tuebingen NW_003334160 [1] MAP 1534810..1534900 DKEY-161L11 BX681417 [3] complement(11949..12039)
TRAJ37 TRAJ37*01 F 2 Tuebingen NW_003334160 [1] MAP 1535115..1535202 DKEY-161L11 BX681417 [3] complement(11647..11734)
TRAJ38 TRAJ38*01 F 2 Tuebingen NW_003334160 [1] MAP 1535784..1535874 DKEY-161L11 BX681417 [3] complement(10975..11065)
TRAJ39 TRAJ39*01 F 2 Tuebingen NW_003334160 [1] MAP 1536132..1536223 DKEY-161L11 BX681417 [3] complement(10626..10717)
TRAJ40 TRAJ40*01 F 2 Tuebingen NW_003334160 [1] MAP 1536694..1536785 DKEY-161L11 BX681417 [3] complement(10064..10155)
TRAJ41 TRAJ41*01 F 2 Tuebingen NW_003334160 [1] MAP 1537143..1537233 DKEY-161L11 BX681417 [3] complement(9616..9706)
TRAJ42 TRAJ42*01 F 2 Tuebingen NW_003334160 [1] MAP 1537509..1537593 DKEY-161L11 BX681417 [3] complement(9256..9340)
TRAJ43 TRAJ43*01 F 2 Tuebingen NW_003334160 [1] MAP 1538177..1538268 DKEY-161L11 BX681417 [3] complement(8581..8672)
TRAJ44 TRAJ44*01 F 2 Tuebingen NW_003334160 [1] MAP 1538482..1538572 DKEY-161L11 BX681417 [3] complement(8277..8367)
TRAJ45 TRAJ45*01 F 2 Tuebingen NW_003334160 [1] MAP 1538940..1539029 DKEY-161L11 BX681417 [3] complement(7820..7909)
TRAJ46 TRAJ46*01 F 2 Tuebingen NW_003334160 [1] MAP 1539595..1539685 DKEY-161L11 BX681417 [3] complement(7164..7254)
TRAJ47 TRAJ47*01 F 2 Tuebingen NW_003334160 [1] MAP 1539887..1539977 DKEY-161L11 BX681417 [3] complement(6872..6962)
TRAJ48 TRAJ48*01 F 2 Tuebingen NW_003334160 [1] MAP 1540337..1540428 DKEY-161L11 BX681417 [3] complement(6421..6512)
TRAJ49 TRAJ49*01 F 2 Tuebingen NW_003334160 [1] MAP 1541063..1541154 DKEY-161L11 BX681417 [3] complement(5695..5786)
TRAJ50 TRAJ50*01 F 2 Tuebingen NW_003334160 [1] MAP 1541480..1541570 DKEY-161L11 BX681417 [3] complement(5279..5369)
TRAJ51 TRAJ51*01 ORF (3) 2 Tuebingen NW_003334160 [1] MAP 1542558..1542642 DKEY-161L11 BX681417 [3] complement(4207..4291)
TRAJ52 TRAJ52*01 F 2 Tuebingen NW_003334160 [1] MAP 1542821..1542912 DKEY-161L11 BX681417 [3] complement(3937..4028)
TRAJ53 TRAJ53*01 F + + 2 Tuebingen NW_003334160 [1] MAP 1543312..1543402 DKEY-161L11 BX681417 [3] complement(3447..3537)
TRAJ54 TRAJ54*01 F 2 Tuebingen NW_003334160 [1] MAP 1543658..1543742 DKEY-161L11 BX681417 [3] complement(3107..3191)
TRAJ55 TRAJ55*01 F 2 Tuebingen NW_003334160 [1] MAP 1544248..1544338 DKEY-161L11 BX681417 [3] complement(2511..2601)
TRAJ56 TRAJ56*01 F 2 Tuebingen NW_003334160 [1] MAP 1544541..1544630 DKEY-161L11 BX681417 [3] complement(2219..2309)
TRAJ57 TRAJ57*01 F 2 Tuebingen NW_003334160 [1] MAP 1544994..1545081 DKEY-161L11 BX681417 [3] complement(1768..1855)
TRAJ58 TRAJ58*01 F 2 Tuebingen NW_003334160 [1] MAP 1545809..1545893 DKEY-161L11 BX681417 [3] complement(956..1040)
TRAJ59 TRAJ59*01 F 2 Tuebingen NW_003334160 [1] MAP 1546161..1546248 DKEY-161L11 BX681417 [3] complement(601..688)
TRAJ60 TRAJ60*01 F 2 Tuebingen NW_003334160 [1] MAP 1546693..1546783 DKEY-161L11 BX681417 [3] complement(66..156)
TRAJ61 TRAJ61*01 F 2 Tuebingen NW_003334160 [1] MAP 1547744..1547831
TRAJ62 TRAJ62*01 F 2 Tuebingen NW_003334160 [1] MAP 1548210..1548297
TRAJ63 TRAJ63*01 F 2 Tuebingen NW_003334160 [1] MAP 1548533..1548620
TRAJ64 TRAJ64*01 F 2 Tuebingen NW_003334160 [1] MAP 1548882..1548972
TRAJ65 TRAJ65*01 F 2 Tuebingen NW_003334160 [1] MAP 1549162..1549249
TRAJ66 TRAJ66*01 F 2 Tuebingen NW_003334160 [1] MAP 1549662..1549747
TRAJ67 TRAJ67*01 F 2 Tuebingen NW_003334160 [1] MAP 1549885..1549966
TRAJ68 TRAJ68*01 F 2 Tuebingen NW_003334160 [1] MAP 1550242..1550323
TRAJ69 TRAJ69*01 F 2 Tuebingen NW_003334160 [1] MAP 1550667..1550751
TRAJ70 TRAJ70*01 F + + 2 Tuebingen NW_003334160 [1] MAP 1551127..1551217
TRAJ71 TRAJ71*01 F 2 Tuebingen NW_003334160 [1] MAP 1551985..1552074
TRAJ72 TRAJ72*01 F 2 Tuebingen NW_003334160 [1] MAP 1552285..1552372
TRAJ73 TRAJ73*01 F 2 Tuebingen NW_003334160 [1] MAP 1552589..1552676
TRAJ74 TRAJ74*01 F 2 Tuebingen NW_003334160 [1] MAP 1553727..1553811
TRAJ75 TRAJ75*01 F 2 Tuebingen NW_003334160 [1] MAP 1554541..1554628
TRAJ76 TRAJ76*01 F 2 Tuebingen NW_003334160 [1] MAP 1554972..1555056
TRAJ77 TRAJ77*01 F 2 Tuebingen NW_003334160 [1] MAP 1555555..1555638
TRAJ78 TRAJ78*01 F 2 Tuebingen NW_003334160 [1] MAP 1555995..1556079
TRAJ79 TRAJ79*01 F 2 Tuebingen NW_003334160 [1] MAP 1556377..1556461
TRAJ80 TRAJ80*01 F 2 Tuebingen NW_003334160 [1] MAP 1557356..1557440
TRAJ81 TRAJ81*01 F 2 Tuebingen NW_003334160 [1] MAP 1558397..1558481
TRAJ82 TRAJ82*01 F 2 Tuebingen NW_003334160 [1] MAP 1558637..1558719
TRAJ83 TRAJ83*01 F 2 Tuebingen NW_003334160 [1] MAP 1559170..1559254
TRAJ84 TRAJ84*01 F 2 Tuebingen NW_003334160 [1] MAP 1560746..1560830
TRAJ85 TRAJ85*01 F 2 Tuebingen NW_003334160 [1] MAP 1561094..1561178
TRAJ86 TRAJ86*01 F 2 Tuebingen NW_003334160 [1] MAP 1562316..1562400
TRAJ87 TRAJ87*01 F 2 Tuebingen NW_003334160 [1] MAP 1563904..1563988
TRAJ88 TRAJ88*01 F 2 Tuebingen NW_003334160 [1] MAP 1564679..1564763
TRAJ89 TRAJ89*01 F 2 Tuebingen NW_003334160 [1] MAP 1565008..1565095
TRAJ90 TRAJ90*01 F 2 Tuebingen NW_003334160 [1] MAP 1565561..1565644 BUSM1-172D23 AL591399 [2] complement(97478..97561)
TRAJ91 TRAJ91*01 F 2 Tuebingen NW_003334160 [1] MAP 1565950..1566032
TRAJ91*02 F 2 BUSM1-172D23 AL591399 [2] (7) complement(97090..97172)
TRAJ92 TRAJ92*01 F 2 Tuebingen NW_003334160 [1] MAP 1566357..1566439
TRAJ92*02 F 2 BUSM1-172D23 AL591399 [2] (7) complement(96683..96765)
TRAJ93 TRAJ93*01 F 2 Tuebingen NW_003334160 [1] MAP 1566653..1566738
TRAJ93*02 F 2 BUSM1-172D23 AL591399 [2] (7) complement(96384..96469)
TRAJ94 TRAJ94*01 F 2 Tuebingen NW_003334160 [1] MAP 1567130..1567214
TRAJ94*02 F 2 BUSM1-172D23 AL591399 [2] (7) complement(95901..95985)
TRAJ95 TRAJ95*01 F 2 Tuebingen NW_003334160 [1] MAP 1567512..1567597 BUSM1-172D23 AL591399 [2] complement(95515..95600)
TRAJ96 TRAJ96*01 ORF (4) 2 Tuebingen NW_003334160 [1] MAP 1567998..1568080
TRAJ96*02 F 2 BUSM1-172D23 AL591399 [2] (7) complement(95033..95115)
TRAJ97 TRAJ97*01 F 2 Tuebingen NW_003334160 [1] MAP 1568550..1568635
TRAJ97*02 F 2 BUSM1-172D23 AL591399 [2] (7) complement(94478..94563)
TRAJ98 TRAJ98*01 F 2 Tuebingen NW_003334160 [1] MAP 1569741..1569826 BUSM1-172D23 AL591399 [2] complement(93277..93362)
TRAJ99 TRAJ99*01 F 2 Tuebingen NW_003334160 [1] MAP 1570476..1570560 BUSM1-172D23 AL591399 [2] complement(92542..92626)
TRAJ100 TRAJ100*01 ORF (3) 2 Tuebingen NW_003334160 [1] MAP 1570947..1571034
TRAJ100*02 ORF (3) 2 BUSM1-172D23 AL591399 [2] (7) complement(92063..92150)
TRAJ101 TRAJ101*01 F 2 Tuebingen NW_003334160 [1] MAP 1571261..1571346 BUSM1-172D23 AL591399 [2] complement(91750..91835)
TRAJ102 TRAJ102*01 ORF (3) 2 Tuebingen NW_003334160 [1] MAP 1571595..1571682 BUSM1-172D23 AL591399 [2] complement(91413..91500)
TRAJ103 TRAJ103*01 F 2 Tuebingen NW_003334160 [1] MAP 1571909..1571993
TRAJ103*02 F 2 BUSM1-172D23 AL591399 [2] (7) complement(91102..91186)
TRAJ104 TRAJ104*01 ORF (5) 2 Tuebingen NW_003334160 [1] MAP 1572537..1572624
TRAJ104*02 ORF (5) 2 BUSM1-172D23 AL591399 [2] (7) complement(90462..90549)
TRAJ105 TRAJ105*01 F + + 2 Tuebingen NW_003334160 [1] MAP 1572750..1572837 BUSM1-172D23 AL591399 [2] complement(90255..90342)
TRAJ106 TRAJ106*01 ORF (3) 2 Tuebingen NW_003334160 [1] MAP 1573016..1573103
TRAJ106*02 ORF (3) 2 BUSM1-172D23 AL591399 [2] (7) complement(89987..90074)
TRAJ107 TRAJ107*01 F 2 Tuebingen NW_003334160 [1] MAP 1573499..1573583
TRAJ107*02 F + + 2 BUSM1-172D23 AL591399 [2] (7) complement(89501..89585)
TRAJ108 TRAJ108*01 F 2 Tuebingen NW_003334160 [1] MAP complement(89501..89585)
TRAJ108*02 F 2 BUSM1-172D23 AL591399 [2] (7) complement(89205..89289)
TRAJ109 TRAJ109*01 ORF (3) 2 Tuebingen NW_003334160 [1] MAP 1574515..1574602
TRAJ109*02 ORF (3) 2 BUSM1-172D23 AL591399 [2] (7) complement(88486..88573)
TRAJ110 TRAJ110*01 F 2 Tuebingen NW_003334160 [1] MAP 1574836..1574920 BUSM1-172D23 AL591399 [2] complement(88168..88252)
TRAJ111 TRAJ111*01 F 2 Tuebingen NW_003334160 [1] MAP 1575416..1575501 BUSM1-172D23 AL591399 [2] complement(87577..87662)
TRAJ112 TRAJ112*01 F 2 Tuebingen NW_003334160 [1] MAP 1520279..1520363 DKEY-161L11 BX681417 [3] complement(26486..26570)
TRAJ113 TRAJ113*01 F 2 Tuebingen NW_003334160 [1] MAP 1521148..1521238 DKEY-161L11 BX681417 [3] complement(25611..25701)
TRAJ114 TRAJ114*01 ORF (3) 2 Tuebingen NW_003334160 [1] MAP 1540733..1540823 DKEY-161L11 BX681417 [3] complement(6026..6116)
TRAJ115 TRAJ115*01 ORF (4) 2 Tuebingen NW_003334160 [1] MAP 1547441..1547525
TRAJ116 TRAJ116*01 F 2 Tuebingen NW_003334160 [1] MAP 1554092..1554179
TRAJ117 TRAJ117*01 ORF (3) 2 Tuebingen NW_003334160 [1] MAP 1557852..1557936
TRAJ118 TRAJ118*01 ORF (4) 2 Tuebingen NW_003334160 [1] MAP 1559489..1559573
TRAJ119 TRAJ119*01 P (6) 2 Tuebingen NW_003334160 [1] MAP 1561473..1561557
TRAJ120 TRAJ120*01 F 2 Tuebingen NW_003334160 [1] MAP 1561977..1562062
TRAJ121 TRAJ121*01 F 2 Tuebingen NW_003334160 [1] MAP 1563134..1563218
TRAJ122 TRAJ122*01 ORF (3) 2 Tuebingen NW_003334160 [1] MAP 1564275..1564359
TRAJ123 TRAJ123*01 F 2 Tuebingen NW_003334160 [1] MAP 1569113..1569197 BUSM1-172D23 AL591399 [2] complement(93915..93999)

MAP: Mapped reference sequences.

IMGT notes:
  1. (1) Non conserved consensus sequence: FGXG is replaced by MGXG
  2. (2) Noncanonical DONOR-SPLICE: ngc instead of ngt
  3. (3) Non conserved consensus sequence: FGXG is replaced by FAXG
  4. (4) Non conserved consensus sequence: FGXG is replaced by FSXG
  5. (5) Non conserved consensus sequence: FGXG is replaced by FTXG
  6. (6) In frame STOP-CODON in J-REGION, non conserved consensus sequence, FGXG is replaced by FAXG
  7. (7) Sequence not in locus reference sequence (sequence NW_003334160)
IMGT references:
  1. [1] Howe,K. et al. Nature 496(7446):498-503(2013). PMID: 23594743
  2. [2] Hammond S. Unpublished.
  3. [3] Kerry G. unpublished.
See also (IMGT Scientific chart):