Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT subgroup IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Accession numbers Positions in the sequence
(L-V-GENE-UNIT)
Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
(L-V-GENE-UNIT)
IGKV1 IGKV1-1 IGKV1-1*01 ORF (1) 11 Hereford IMGT000047 MAP 189620..190119
IGKV1-4 IGKV1-4*01 F 11 Hereford IMGT000047 MAP 164709..165209
IGKV1-5 IGKV1-5*01 P (2) 11 Hereford IMGT000047 MAP 153561..154052
IGKV1-21 IGKV1-21*01 P (3) 11 Hereford IMGT000047 MAP 60272..60769
IGKV1-25 IGKV1-25*01 P (4) 11 Hereford IMGT000047 MAP 10003..10497
IGKV2 IGKV2-6 IGKV2-6*01 F 11 Hereford IMGT000047 MAP 149013..149803
IGKV2-7 IGKV2-7*01 P (5) 11 Hereford IMGT000047 MAP 138222..139005
IGKV2-9 IGKV2-9*01 F 11 + + Hereford IMGT000047 MAP 131810..132613
IGKV2-10 IGKV2-10*01 P (6) 11 Hereford IMGT000047 MAP 124447..125222
IGKV2-12 IGKV2-12*01 ORF (7) 11 Hereford IMGT000047 MAP 116526..117330
IGKV2-13 IGKV2-13*01 P (6) 11 Hereford IMGT000047 MAP 105149..105926
IGKV2-15 IGKV2-15*01 F 11 + + Hereford IMGT000047 MAP 98436..99227
IGKV2-16 IGKV2-16*01 P (4) 11 Hereford IMGT000047 MAP 87201..87978
IGKV2-18 IGKV2-18*01 F 11 Hereford IMGT000047 MAP 80126..80926
IGKV2-19 IGKV2-19*01 P (2) 11 Hereford IMGT000047 MAP 68843..69620
IGKV2-22 IGKV2-22*01 P (8) 11 Hereford IMGT000047 MAP 54376..55185
IGKV2-23 IGKV2-23*01 P (9) 11 Hereford IMGT000047 MAP 35388..36161
IGKV3 IGKV3-24 IGKV3-24*01 P (10) 11 Hereford IMGT000047 MAP 14142..15189
IGKV8 IGKV8-3 IGKV8-3*01 F 11 + + Hereford IMGT000047 MAP 180766..181340
IGKV(II) IGKV(II)-2 IGKV(II)-2*01 P (11) 11 Hereford IMGT000047 MAP complement(<186716..186853) (13)
IGKV(II)-8 IGKV(II)-8*01 P (12) 11 Hereford IMGT000047 MAP 135557..135841 (13)
IGKV(II)-11 IGKV(II)-11*01 P (12) 11 Hereford IMGT000047 MAP 121793..122077 (13)
IGKV(II)-14 IGKV(II)-14*01 P (12) 11 Hereford IMGT000047 MAP 102516..102801 (13)
IGKV(II)-17 IGKV(II)-17*01 P (12) 11 Hereford IMGT000047 MAP 84529..84812 (13)
IGKV(II)-20 IGKV(II)-20*01 P (12) 11 Hereford IMGT000047 MAP 66823..67116 (13)

MAP: Mapped reference sequences.

IMGT notes:
  1. (1) noncanonical DONOR-SPLICE, noncanonical ACCEPTOR-SPLICE
  2. (2) STOP-CODON in V-REGION, frameshift in V-REGION
  3. (3) frameshift in V-REGION
  4. (4) frameshift in L-PART1, frameshift in V-REGION
  5. (5) frameshift in L-PART1
  6. (6) frameshift in L-PART1, frameshifts in V-REGION
  7. (7) no CONSERVED-TRP
  8. (8) STOP-CODON in V-REGION
  9. (9) STOP-CODON in L-PART1, frameshift in L-PART1
  10. (10) frameshifts in V-REGION
  11. (11) truncated pseudogene not assigned to subgroups with functional genes
  12. (12) no L-PART1, frameshifts in V-REGION, no V-RS
  13. (13) positions of V-REGION
Created:
11/06/2019
Last updated:
04/07/2019
Authors:
Perrine Pégorier
Editors:
Chantal Ginestoux