Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
TRBJ1-1 TRBJ1-1*01 F A2 + + Abyssinian IMGT000037 MAP 265945..266020
TRBJ1-2 TRBJ1-2*01 F A2 + + Abyssinian IMGT000037 MAP 266084..266155
TRBJ1-3 TRBJ1-3*01 ORF (1) A2 Abyssinian IMGT000037 MAP 266687..266764
TRBJ1-4 TRBJ1-4*01 P (2) A2 Abyssinian IMGT000037 MAP 267550..267625
TRBJ1-5 TRBJ1-5*01 F A2 Abyssinian IMGT000037 MAP 268028..268108
TRBJ1-6 TRBJ1-6*01 P (6) A2 Abyssinian IMGT000037 MAP 267278..267351
TRBJ2-1 TRBJ2-1*01 F (3) A2 + + Abyssinian IMGT000037 MAP 275264..275341
TRBJ2-2 TRBJ2-2*01 F A2 Abyssinian IMGT000037 MAP 275459..275537
TRBJ2-3 TRBJ2-3*01 F A2 Abyssinian IMGT000037 MAP 275702..275778
TRBJ2-4 TRBJ2-4*01 F A2 Abyssinian IMGT000037 MAP 275841..275917
TRBJ2-5 TRBJ2-5*01 P (4) A2 Abyssinian IMGT000037 MAP 275944..275994 (5)
TRBJ2-6 TRBJ2-6*01 F A2 Abyssinian IMGT000037 MAP 276142..276216

MAP: Mapped reference sequences.

IMGT notes:
  1. (1) noncanonical J-NONAMER: ggttctgaa instead of ggtttttgt
  2. (2) frameshift in J-REGION: insertion of 1 nt
  3. (3) noncanonical J-NONAMER: aaatttttg instead of ggtttttgt, however this J-GENE has been found rearranged
  4. (4) no J-RS and frameshift in J-REGION: insertion of 1 nt
  5. (5) positions of J-REGION
  6. (6) STOP-CODON in J-REGION
Created:
21/02/2019
Last updated:
23/07/2019
Authors:
Nguefack Ngoune Viviane
Editors:
Chantal Ginestoux