Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name IMGT allele name Fct R T Pr Positions in the locus IMGT/LIGM-DB reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Accession numbers Positions in the sequence (J-REGION) Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence (J-REGION)
TRBJ1-1 TRBJ1-1*01 F Boxer AAEX02035465 [1] 49933-49980
TRBJ1-2 TRBJ1-2*01 F Boxer AAEX02035465 [1] 49802-49845
TRBJ1-3 TRBJ1-3*01 P Boxer AAEX02035465 [1] (1) 49194-49243
TRBJ1-4 TRBJ1-4*01 F Boxer AAEX02035465 [1] 48612-48661
TRBJ1-5 TRBJ1-5*01 F Boxer AAEX02035465 [1] 48358-48407
TRBJ1-6 TRBJ1-6*01 F Boxer AAEX02035465 [1] 47894-47946 HE653929 [2] (2) 1-41
TRBJ2-1 TRBJ2-1*01 P (3) + + - HE653929 [2] 7330-7379
TRBJ2-2 TRBJ2-2*01 F + + - HE653929 [2] 7510-7560
TRBJ2-3 TRBJ2-3*01 F + + - HE653929 [2] 7761-7809
TRBJ2-4 TRBJ2-4*01 ORF (4) - - - HE653929 [2] 7913-7961
TRBJ2-5 TRBJ2-5*01 F + + - HE653929 [2] 8052-8100
TRBJ2-6 TRBJ2-6*01 F + + - HE653929 [2] 8568-8613
IMGT notes:
  1. (1) Pseudogene because of STOP CODON in J-REGION
  2. (2) J-REGION partial in 5'
  3. (3) In frame STOP-CODON in J-REGION
  4. (4) Non canonical J-NONAMER: tgctgcgca instead of ggttttgt
IMGT references:
  1. [1] Lindblad-Toh K. et al., Nature, 438, 803-819 (2005). PMID: 16341006
  2. [2] Mineccia M. et al., Dev Comp Immunol., 37, 279-293 (2012). PMID: 22465586
See also (IMGT Scientific chart):