Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT subgroup IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Accession numbers Positions in the sequence
(L-V-GENE-UNIT)
Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
(L-V-GENE-UNIT)
TRDV1 TRDV1-1 TRDV1-1*01 F IMGT000016 [1] 5496..6095
TRDV1-1D TRDV1-1D*01 F IMGT000017 [1] 19092..19692
TRDV1-1N TRDV1-1N*01 F IMGT000018 [1] 28557..29157
TRDV2 TRDV2 TRDV2*01 F JH481615 [1] 41609..42133
TRDV4 TRDV4 TRDV4*01 P (1) JH481615 [1] complement(91751..92376)
TRDV5 TRDV5 TRDV5*01 P (2) JH481615 [1] 20180..20738
IMGT notes:
  1. (1) frameshift in L-PART1, STOP-CODON in V-REGION: position 51
  2. (2) no INIT-CODON: Thr instead of Met
IMGT references:
  1. [1] Linguiti, G. et al., BMC Genomics, 17, 634 (2016). PMID: 27528257
Created:
31/08/2018
Last updated:
31/08/2018
Authors:
Perrine Pégorier
Editor:
Chantal Ginestoux