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Citing this page: Barbié, V. and Lefranc, M.-P., Exp. Clin. Immunogenet., 15, 171-183 (1998) pdf

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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Rearranged genomic or cDNA have been included in the Alignments of alleles and Tables of alleles when several sequences from independent sources have been found with the same mutations. These alleles need to be confirmed by complete germline genomic sequences.

IMGT gene name IMGT allele name Fct Chromosomal localization R T Pr Positions in the locus IMGT/LIGM-DB reference sequences IMGT/LIGM-DB sequences from the literature
Clone names Accession numbers Positions in the sequence Secondary accession numbers Clone names Accession numbers Positions in the sequence
IGKJ1 IGKJ1*01 F 2p11.2 J1 J00242 [1] MAP X61584 [12] MAP
X67858 [5] MAP
IGKJ2 IGKJ2*01 F 2p11.2 J2 J00242 [1] MAP X63370 [3] MAP
X61584 [12] MAP
X67858 [5] MAP
IGKJ2*02 (F) 2p11.2 J2 Z70260 [9] #c,MAP
IGKJ2*03 (F) 2p11.2 J2 U95246 [8] #c,MAP
IGKJ2*04 (F) 2p11.2 J2 Z46620 [7] #c,MAP L40735 [6] #c,MAP
AF189007 [11] (1) MAP
IGKJ3 IGKJ3*01 F 2p11.2 J3 J00242 [1] MAP X63370 [3] MAP
X61584 [12] MAP
X67858 [5] MAP
IGKJ4 IGKJ4*01 F 2p11.2 J4 J00242 [1] MAP D90159 [2] MAP
X61584 [12] MAP
X67858 [5] MAP
IGKJ4*02 (F) 2p11.2 J4 AF103571 [10] #c,MAP AF189008 [11] (1) MAP
IGKJ5 IGKJ5*01 F 2p11.2 J5 J00242 [1] MAP X61584 [12] MAP
X67858 [5] MAP

#c: Rearranged cDNA.
MAP: Mapped sequences.

IMGT notes:
  1. (1) Partial J-REGION in 3' side.
IMGT references:
  1. [1] Hieter P.A. et al., J. Biol. Chem., 257, 1516-1522 (1981). PMID: 6276389
  2. [2] Kato S et al., Gene, 97, 239-244 (1991). PMID: 1999287
  3. [3] Huber C et al., Eur. J. Immunol., 22, 1561-1565 (1992). PMID: 1601042
  4. [4] Martin T et al., Eur. J. Immunol., 22, 1773-1779 (1992). PMID: 1339352
  5. [5] Whitehurst C et al., Nucleic Acids Res., 20, 4929-4930 (1992). PMID: 1408808
  6. [6] Bridges S.L. Jr et al., J. Clin. Invest., 96, 831-841 (1995). PMID: 7635977
  7. [7] Giachino C et al., J. Exp. Med., 181, 1245-1250 (1995). PMID: 7869042
  8. [8] Manheimer-Lory A.J. et al., J. Clin. Invest., 100, 2538-2546 (1997). PMID: 9366568
  9. [9] Sahota S.S. et al., Blood, 89, 219-226 (1997). PMID: 8978295
  10. [10] de Wildt R.M. et al., J. Mol. Biol., 285, 895-901 (1999). PMID: 9887257
  11. [11] Feeney A.J., Immunogenetics, 51, 487-488 (2000). PMID: 10866115
  12. [12] Stueber, Unpublished.
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