Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes
Citing this page: Folch, G. and Lefranc, M.-P., Exp. Clin. Immunogenet., 17, 107-114 (2000) PMID: 10810227 pdf

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct Chromosomal localization R T Pr Positions in the locus IMGT/LIGM-DB reference sequences IMGT/LIGM-DB sequences from the literature
Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
Secondary accession numbers Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
TRBJ1-1 TRBJ1-1*01 F 7q34 + + + Jbeta1.1 MAP K02545 [1] 721..796 Jbeta1.1 MAP M14158 [3] 721..796
L36092 [5] (3) 640907..640982
U66061 [5] (3) 188584..188659
IMGT000021 555507..555582
TRBJ1-2 TRBJ1-2*01 F 7q34 + + + Jbeta1.2 MAP K02545 [1] 858..933 Jbeta1.2 MAP M14158 [3] 858..933
L36092 [5] (3) 641044..641119
U66061 [5] (3) 188721..188796
IMGT000021 555644..555719
TRBJ1-3 TRBJ1-3*01 F 7q34 + + + Jbeta1.3 MAP M14158 [3] 1471..1548 Jbeta1.3 MAP L36092 [5] (3) 641657..641734
U66061 [5] (3) 189334..189411
IMGT000021 556257..556334
TRBJ1-4 TRBJ1-4*01 F 7q34 + + + Jbeta1.4 MAP M14158 [3] 2067..2145 Jbeta1.4 MAP L36092 [5] (3) 642252..642330
U66061 [5] (3) 189929..190007
IMGT000021 556852..556930
TRBJ1-5 TRBJ1-5*01 F 7q34 + + + Jbeta1.5 MAP M14158 [3] 2340..2417 Jbeta1.5 MAP L36092 [5] (3) 642525..642602
U66061 [5] (3) 190202..190279
IMGT000021 557125..557202
TRBJ1-6 TRBJ1-6*01 F 7q34 + + + Jbeta1.6 MAP M14158 [3] 2831..2911 IMGT000021 557615..557695
TRBJ1-6*02 F 7q34 Jbeta1.6 MAP L36092 [5] (3) 643015..643095 U66061 [5] (3)
TRBJ2-1 TRBJ2-1*01 F 7q34 + + + Jbeta2.1 MAP X02987 [2] 772..849 Jbeta2.1 MAP M14159 [3] 1201..1278
M31346 [4] 24..101
L36092 [5] (3) 650392..650469
IMGT000021 564992..565070
TRBJ2-2 TRBJ2-2*01 F 7q34 + + + Jbeta2.2 MAP X02987 [2] 967..1045 Jbeta2.2 MAP M14159 [3] 1396..1474
L36092 [5] (3) 650587..650665
U66061 [5] (3) 198264..198342
IMGT000021 565187..565265
TRBJ2-2P TRBJ2-2P*01 ORF (1) 7q34 Jbeta2P MAP X02987 [2] 1125..1177 Jbeta2.2P MAP M14159 [3] 1561..1606
L36092 [5] (3) 650752..650797
U66061 [5] 198429..198474
IMGT000021 565352..565397
TRBJ2-3 TRBJ2-3*01 F 7q34 + + + Jbeta2.3 MAP X02987 [2] 1254..1330 Jbeta2.3 MAP M14159 [3] 1683..1759
L36092 [5] (3) 650874..650950
U66061 [5] 198551..198627
IMGT000021 565474..565550
TRBJ2-4 TRBJ2-4*01 F 7q34 + + + Jbeta2.4 MAP X02987 [2] 1404..1481 Jbeta2.4 MAP M14159 [3] 1834..1911
L36092 [5] (3) 651025..651102
U66061 [5] (3) 198702..198779
IMGT000021 565625..565702
TRBJ2-5 TRBJ2-5*01 F 7q34 + + + Jbeta2.5 MAP X02987 [2] 1525..1600 Jbeta2.5 MAP M14159 [3] 1954..2028
L36092 [5] (3) 651146..651221
U66061 [5] (3) 198823..198898
IMGT000021 565746..565821
TRBJ2-6 TRBJ2-6*01 F 7q34 + + + Jbeta2.6 MAP X02987 [2] 1645..1725 Jbeta2.6 MAP M14159 [3] 2071..2151
L36092 [5] (3) 651266..651346
IMGT000021 565866..565946
TRBJ2-7 TRBJ2-7*01 F 7q34 + + + Jbeta2.7 MAP M14159 [3] 2288..2362 Jbeta2.7 MAP L36092 [5] (3) 651483..651557
U66061 [5] (3) 198943..199023
IMGT000021 566083..566157
TRBJ2-7*02 ORF (2) 7q34 Jbeta2.7 MAP X02987 [2] 1862..1936

MAP: Mapped sequences.

IMGT notes:
  1. (1) This sequence has diverged considerably from that of other TRBJ2-2, and it has lost J-NONAMER [2], J-PHE replaced by Leu in J-GENE.
  2. (2) J-PHE replaced by Val in J-SEGMENT.
  3. (3) The original L36092 sequence (684973 bp) has been split in EMBL into three sequences of 267156 bp (U66059), 215422 bp (U66060) and 232650 bp (U66061), L36092 has become secondary accession number of U66059, U66060 and U66061. In IMGT, the original sequence L36092 which is fully annotated has also been kept as primary accession number, in addition to U66059, U66060 and U66061.
IMGT references:
  1. [1] Clark, S.P. et al., Nature, 311, 387-389 (1984). PMID: 6434993
  2. [2] Tunnacliffe, A. et al., Nucleic. Acids. Research, 13, 6651-6661 (1985). PMID: 2997718
  3. [3] Toyonaga, B. et al., Proc. Natl. Acad. Sci. USA., 82, 8624-8628 (1985). PMID: 3866244
  4. [4] Ikuta, K. et al., Nucleic Acids Res., 14, 4899-4909 (1986). PMID: 3487774
  5. [5] Rowen, L. et al., Science, 272, 1755-1762 (1996). PMID: 8650574
Created:
23/07/1997
Last updated:
17/09/2018
Authors:
Géraldine Folch, Imène Chentli
Editor:
Chantal Ginestoux