Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT subgroup IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Accession numbers Positions in the sequence
(L-V-GENE-UNIT)
Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
(L-V-GENE-UNIT)
TRAV4 TRAV4 TRAV4*01 F 17 Thorbecke inbred IMGT000031 MAP 10001..10778
TRAV5 TRAV5-1 TRAV5-1*01 P (1) 17 Thorbecke inbred IMGT000031 MAP 28791..29316
TRAV5-2 TRAV5-2*01 F 17 Thorbecke inbred IMGT000031 MAP 44654..45190
TRAV5-3 TRAV5-3*01 F 17 Thorbecke inbred IMGT000031 MAP 59194..59731
TRAV5-4 TRAV5-4*01 F 17 Thorbecke inbred IMGT000031 MAP 72095..72642
TRAV5-5 TRAV5-5*01 F 17 Thorbecke inbred IMGT000031 MAP 114151..114687
TRAV5-6 TRAV5-6*01 P (2) 17 Thorbecke inbred IMGT000031 MAP 130908..131451
TRAV5-7 TRAV5-7*01 F 17 Thorbecke inbred IMGT000031 MAP 138747..139283
TRAV5-8 TRAV5-8*01 F 17 Thorbecke inbred IMGT000031 MAP 143754..144287
TRAV5-9 TRAV5-9*01 F 17 Thorbecke inbred IMGT000031 MAP 152951..153487
TRAV5-10 TRAV5-10*01 F 17 Thorbecke inbred IMGT000031 MAP 165422..165964
TRAV8 TRAV8-1 TRAV8-1*01 F 17 Thorbecke inbred IMGT000031 MAP 213765..214263
TRAV8-2 TRAV8-2*01 F 17 Thorbecke inbred IMGT000031 MAP 229374..229860
TRAV8-3 TRAV8-3*01 F 17 Thorbecke inbred IMGT000031 MAP 277716..278205
TRAV8-4 TRAV8-4*01 F 17 Thorbecke inbred IMGT000031 MAP 304631..305120
TRAV8-5 TRAV8-5*01 F 17 Thorbecke inbred IMGT000031 MAP 451088..451596
TRAV9 TRAV9-1 TRAV9-1*01 F 17 Thorbecke inbred IMGT000031 MAP 222467..222977
TRAV9-2 TRAV9-2*01 F 17 Thorbecke inbred IMGT000031 MAP 272440..272941
TRAV9-3 TRAV9-3*01 F 17 Thorbecke inbred IMGT000031 MAP 297227..297725
TRAV9-4 TRAV9-4*01 F 17 Thorbecke inbred IMGT000031 MAP 332554..333043
TRAV10 TRAV10 TRAV10*01 F 17 Thorbecke inbred IMGT000031 MAP 334804..335407
TRAV12 TRAV12 TRAV12*01 F 17 Thorbecke inbred IMGT000031 MAP 343784..344351
TRAV13 TRAV13-1 TRAV13-1*01 P (3) 17 Thorbecke inbred IMGT000031 MAP 251406..251930
TRAV13-2 TRAV13-2*01 F 17 Thorbecke inbred IMGT000031 MAP 267066..267586
TRAV13-3 TRAV13-3*01 F 17 Thorbecke inbred IMGT000031 MAP 290887..291407
TRAV13-4 TRAV13-4*01 F 17 Thorbecke inbred IMGT000031 MAP 324083..324623
TRAV14 TRAV14-1 TRAV14-1*01 F 17 Thorbecke inbred IMGT000031 MAP 256523..257077
TRAV14-2 TRAV14-2*01 F 17 Thorbecke inbred IMGT000031 MAP 326732..327283
TRAV16 TRAV16 TRAV16*01 F 17 Thorbecke inbred IMGT000031 MAP 353763..354241
TRAV17 TRAV17 TRAV17*01 F 17 Thorbecke inbred IMGT000031 MAP 364421..364948
TRAV18 TRAV18 TRAV18*01 F 17 Thorbecke inbred IMGT000031 MAP 369307..369808
TRAV19 TRAV19 TRAV19*01 F 17 Thorbecke inbred IMGT000031 MAP 373029..373593
TRAV20 TRAV20 TRAV20*01 P (4) 17 Thorbecke inbred IMGT000031 MAP 393491..394026
TRAV21 TRAV21 TRAV21*01 P (5) 17 Thorbecke inbred IMGT000031 MAP 398953..399505
TRAV23 TRAV23 TRAV23*01 F 17 Thorbecke inbred IMGT000031 MAP 420535..421090
TRAV24 TRAV24 TRAV24*01 F 17 Thorbecke inbred IMGT000031 MAP 442138..442665
TRAV26 TRAV26 TRAV26*01 F 17 Thorbecke inbred IMGT000031 MAP 524097..524866
TRAV27 TRAV27 TRAV27*01 P (6) 17 Thorbecke inbred IMGT000031 MAP 474689..475205
TRAV28 TRAV28 TRAV28*01 P (7) 17 Thorbecke inbred IMGT000031 MAP 482869..483374
TRAV29 TRAV29 TRAV29*01 P (8) 17 Thorbecke inbred IMGT000031 MAP 496159..496715
TRAV32 TRAV32 TRAV32*01 F 17 Thorbecke inbred IMGT000031 MAP 519841..520377
TRAV35 TRAV35 TRAV35*01 P (9) 17 Thorbecke inbred IMGT000031 MAP <535588..535834 (13)
TRAV36 TRAV36 TRAV36*01 P (10) 17 Thorbecke inbred IMGT000031 MAP 542622..543172
TRAV37 TRAV37 TRAV37*01 F 17 Thorbecke inbred IMGT000031 MAP 564850..565422
TRAV38 TRAV38-1 TRAV38-1*01 F 17 Thorbecke inbred IMGT000031 MAP 570508..571144
TRAV38-2 TRAV38-2*01 F 17 Thorbecke inbred IMGT000031 MAP 577503..578141
TRAV39 TRAV39 TRAV39*01 F 17 + (14) + Thorbecke inbred IMGT000031 MAP 595260..595793
TRAV41 TRAV41 TRAV41*01 F 17 Thorbecke inbred IMGT000031 MAP 625919..626482
TRAV42 TRAV42 TRAV42*01 F 17 Thorbecke inbred IMGT000031 MAP 382634..383118
TRAV43 TRAV43-1 TRAV43-1*01 ORF (11) 17 Thorbecke inbred IMGT000031 MAP 23459..24011
TRAV43-2 TRAV43-2*01 ORF (11) 17 Thorbecke inbred IMGT000031 MAP 243301..243839
TRAV43-3 TRAV43-3*01 F 17 Thorbecke inbred IMGT000031 MAP 261435..261995
TRAV43-4 TRAV43-4*01 F 17 Thorbecke inbred IMGT000031 MAP 282717..283296
TRAV43-5 TRAV43-5*01 F 17 Thorbecke inbred IMGT000031 MAP 316425..316986
TRAV44 TRAV44-1 TRAV44-1*01 P (12) 17 Thorbecke inbred IMGT000031 MAP 88363..88869
TRAV44-2 TRAV44-2*01 F 17 Thorbecke inbred IMGT000031 MAP 93266..93771
TRAV44-3 TRAV44-3*01 F 17 Thorbecke inbred IMGT000031 MAP 107192..107698
TRAV44-4 TRAV44-4*01 F 17 Thorbecke inbred IMGT000031 MAP 193078..193585
TRAV44-5 TRAV44-5*01 F 17 Thorbecke inbred IMGT000031 MAP 204928..205442
TRAV44-6 TRAV44-6*01 F 17 Thorbecke inbred IMGT000031 MAP 209398..209906
TRAV45 TRAV45 TRAV45*01 F 17 Thorbecke inbred IMGT000031 MAP 409423..409917

MAP: Mapped reference sequences.

IMGT notes:
  1. (1) no INIT-CODON: Arg instead of Met
  2. (2) no INIT-CODON: Thr instead of Met
  3. (3) no INIT-CODON: Lys instead of Met
  4. (4) no INIT-CODON: Ser instead of Met, frameshifts in V-REGION: several insertions and deletions
  5. (5) frameshifts in V-REGION: several insertions and deletions
  6. (6) frameshift in V-REGION: deletion of 4 nt in FR3-IMGT
  7. (7) no INIT-CODON: Arg instead of Met, STOP-CODON in V-REGION: positions 6, 9 and 41
  8. (8) frameshifts in V-REGION: several insertions and deletions
  9. (9) no INIT-CODON: Ile instead of Met, frameshifts in V-REGION: several insertions and deletions
  10. (10) no INIT-CODON: Lys instead of Met, frameshifts in V-REGION: several insertions and deletions
  11. (11) noncanonical ACCEPTOR-SPLICE: ntgnn instead of nagnn
  12. (12) the splicing between the DONOR-SPLICE of L-PART1 and the ACCEPTOR-SPLICE of L-PART2 results into a STOP-CODON
  13. (13) Positions of V-REGION
  14. (14) TRAV39*01 is rearranged to TRDJ2*01 in D38119.1 (V-REGION partial in 5', codons 1-25 (74 nt) missing)
Created:
20/11/2018
Last updated:
23/11/2018
Authors:
Perrine Pégorier
Editor:
Chantal Ginestoux