Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
TRDJ1 TRDJ1*01 P (1) 17 Thorbecke inbred IMGT000031 MAP 787323..787373 (2)
TRDJ2 TRDJ2*01 F 17 + (3) + Thorbecke inbred IMGT000031 MAP 796875..796956
TRDJ3 TRDJ3*01 F 17 Thorbecke inbred IMGT000031 MAP 799147..799232

MAP: Mapped reference sequences.

IMGT notes:
  1. (1) no J-RS, STOP-CODON in J-REGION
  2. (2) Positions of J-REGION
  3. (3) TRAV39*01 is rearranged to TRDJ2*01 in D38119.1 (V-REGION partial in 5', codons 1-25 (74 nt) missing)
Created:
20/11/2018
Last updated:
21/11/2018
Authors:
Perrine Pégorier
Editor:
Chantal Ginestoux