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"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
(J-GENE-UNIT)
TRGJ1 TRGJ1*01 F 10 + + Thorbecke inbred IMGT000030 [1] MAP 56165..56256 New Zealand TRGJ1 AY748325 [2] 5..96
TRGJ2 TRGJ2*01 F 10 + + Thorbecke inbred IMGT000030 [1] MAP 58705..58782 New Zealand TRGJ2 AY748326 [2] 5..82

MAP: Mapped reference sequences.

IMGT references:
  1. [1] Massari S. et al., Immunogenetics, 64, 773-779 (2012). PMID: 22772779
  2. [2] Cho K.S. et al., Immunogenetics, 57, 352-363 (2005). PMID: 15868143
Created:
08/10/2018
Last updated:
28/11/2018
Authors:
Perrine Pégorier
Editor:
Chantal Ginestoux