Here you are: IMGT Web resources > IMGT Repertoire (IG and TR) > 1. Locus and genes

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT subgroup IMGT gene name IMGT allele name Fct Chromosomal
localization
R T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Accession numbers Positions in the sequence
(L-V-GENE-UNIT)
Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
(L-V-GENE-UNIT)
TRGV1 TRGV1-1 TRGV1-1*01 F 10 Thorbecke inbred IMGT000030 [1] MAP 10001..10511 New Zealand TRGV1.1a AY748327 [2] 1..511
TRGV1.1e AY748331 [2] 1..511
TRGV1-1*02 F New Zealand TRGV1.1b AY748328 [2] (4) 1..511
TRGV1-1*03 F New Zealand TRGV1.1c AY748329 [2] (4) 1..507 New Zealand TRGV1.1d AY748330 [2] 1..507
TRGV1-2 TRGV1-2*01 F 10 Thorbecke inbred IMGT000030 [1] MAP 14200..14726
TRGV1-2D TRGV1-2D*01 F 10 Thorbecke inbred IMGT000030 [1] MAP <7383..7483 (5)
TRGV1-3 TRGV1-3*01 F 10 Thorbecke inbred IMGT000030 [1] MAP 17141..17647
TRGV1-3*02 F New Zealand TRGV1.2a AY748332 [2] (4) 1..523
TRGV1-3*03 F + + New Zealand TRGV1.2b AY748333 [2] (4) 1..509
TRGV1-3*04 F New Zealand TRGV1.2c AY748334 [2] (4) 1..528
TRGV1-3*05 F New Zealand TRGV1.5 AY748342 [2] (4) 1..509
TRGV1-3*06 F New Zealand TRGV1.6a AY748343 [2] (4) 1..509
TRGV1-3*07 F New Zealand TRGV1.6b AY748344 [2] (4) 1..511
TRGV1-3*08 F New Zealand TRGV1.6c AY748345 [2] (4) 1..526
TRGV1-4 TRGV1-4*01 F 10 Thorbecke inbred IMGT000030 [1] MAP 21000..21516
TRGV1-4*02 F New Zealand TRGV1.4a AY748337 [2] (4) 1..541
TRGV1-4*03 F New Zealand TRGV1.4b AY748338 [2] (4) 1..529 New Zealand TRGV1.4d AY748340 [2] 1..511
TRGV1-5 TRGV1-5*01 F 10 Thorbecke inbred IMGT000030 [1] MAP 23989..24495 New Zealand TRGV1.3b AY748336 [2] 171..>463 (5)
TRGV1-5*02 F New Zealand TRGV1.3a AY748335 [2] (4) 1..511
TRGV1-6 TRGV1-6*01 F 10 Thorbecke inbred IMGT000030 [1] MAP 27855..28371 New Zealand TRGV1.4c AY748339 [2] 1..533
TRGV1-6*02 F New Zealand TRGV1.4e AY748341 [2] (4) 1..516
TRGV1-7 TRGV1-7*01 ORF (1) 10 Thorbecke inbred IMGT000030 [1] MAP 31008..31537 New Zealand TRGV1.7a AY748346 [2] 1..530
TRGV1-7*02 ORF (1) New Zealand TRGV1.7b AY748347 [2] (4) 1..527
TRGV2 TRGV2 TRGV2*01 ORF (2) 10 + + Thorbecke inbred IMGT000030 [1] MAP 38893..39397 New Zealand TRGV2 AY748348 [2] 1..505
TRGV3 TRGV3 TRGV3*01 F 10 Thorbecke inbred IMGT000030 [1] MAP 43012..43517
TRGV4 TRGV4 TRGV4*01 ORF (3) 10 Thorbecke inbred IMGT000030 [1] MAP 48318..48786

MAP: Mapped reference sequences.

IMGT notes:
  1. (1) noncanonical V-NONAMER: ttgagaatt instead of ctgaaaatc
  2. (2) noncanonical V-NONAMER: acaagatct instead of ctgaaaatc
  3. (3) noncanonical V-NONAMER: aaggaaact instead of ctgaaaatc
  4. (4) Sequence not in locus reference sequence (assembly OryCun2.0)
  5. (5) Positions of V-REGION
IMGT references:
  1. [1] Massari S. et al., Immunogenetics, 64, 773-779 (2012). PMID: 22772779
  2. [2] Cho K.S. et al., Immunogenetics, 57, 352-363 (2005). PMID: 15868143
Created:
08/10/2018
Last updated:
23/11/2018
Authors:
Perrine Pégorier
Editor:
Chantal Ginestoux