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"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct Chromosomal
localization
T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Exons Accession numbers Positions in the sequence Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
TRAC TRAC*01 F 7 Rambouillet CM008478.1 EX1 IMGT000048 MAP 2866595..2866867 Texel OviAri_1_chr7 [1] MAP complement(120098..120370)
EX2 IMGT000048 MAP 2868870..2868914 Texel OviAri_1_chr7 [1] MAP complement(118047..118091)
EX3 IMGT000048 MAP 2870320..2870427 Texel OviAri_1_chr7 [1] MAP complement(116532..116639)
EX4UTR (1) IMGT000048 MAP 2871065..2871604 Texel OviAri_1_chr7 [1] MAP complement(115355..115894)

MAP: Mapped reference sequences.

IMGT notes:
  1. (1) Since EX4 is untranslated, nucleotide differences observed in EX4 are not taken into account for the description of alleles
IMGT references:
  1. [1] Piccinni B. et al., BMC Genomics, 16:709 (2015). PMID: 26383271
Created:
21/06/2016
Last updated:
14/10/2020
Authors:
Imène Chentli, Perrine Pégorier