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MH genes by chromosomal localization (18.43-20.43 cM on chromosome 17p)

MH group (1) MH subgroup IMGT gene name IMGT gene definition Strand Chromosomal localization Size (bp) Localization source MGI entry Gene ID Other names
cM position bp position start bp position end
(2) 18.40 MGI:95907 110131 H2-Ke1, H-2Ke1, Ke-1
TAPBP (3) + 18.41 34056423 34066235 9813 NCBI Build 37 MGI:1201689 21356 Tapbp, D17Wsu91e, Tapasin, TPN
(2) - 18.41 34075868 34077250 1383 NCBI Build 37 MGI:95908 14976 H2-Ke2
MH1 MH1-K MH1-K2 (4) Major histocompatibility 1 K2 - 18.43 34112135 34115735 3601 NCBI Build 37 MGI:95906 14974 H2-K2, H-2K1, H-2K1K, H-2K2, MH1-K1
MH1-K1 Major histocompatibility 1 K1 - 18.44 34132973 34137229 4257 NCBI Build 37 MGI:95904 14973 MH1-K1, H-2K
  (2,3) - 18.48 34162980 34165002 2023 NCBI Build 37 MGI:95911 14979 H2-Ke6, H-2Ke6, Ring2
(2) 18.49 MGI:95910 110151 H2-Ke5, Ke-5, H-2Ke5, H2-Ke5
MH2 MH2-PA MH2-PA (4) Major histocompatibility 2 P alpha + 18.51 34221558 34222797 1240 NCBI Build 37 MGI:105314 15003 H2-PA, H2-Pa
MH2-PB MH2-PB (4) Major histocompatibility 2 P beta 18.51 MGI:95926 15004 H2-PB, H-2Ab, H-2I, H-2Pb, H2-Ab3, Ia7, Pb, H2-Pb
MH2-OA MH2-OA Major histocompatibility 2 O alpha + 18.52 34229377 34232179 2803 NCBI Build 37 MGI:95924 15001 H2-DOA, H-2Oa, H2-Oa
MH2-MA MH2-MA Major histocompatibility 2 M alpha + 18.56 34272594 34276027 3434 NCBI Build 37 MGI:95921 14998 H2-DMA, H-2Ma, H2-Ma, H2-Dma
MH2-MB MH2-MB2 Major histocompatibility 2 M beta 2 + 18.57 34282258 34288498 6241 NCBI Build 37 MGI:95923 15000 H2-DMB2, H-2Mb2, H2-Mb2, H2-DMb2
MH2-MB1 Major histocompatibility 2 M beta 1 + 18.58 34290136 34297174 7039 NCBI Build 37 MGI:95922 14999 H2-DMB1, H-2Mb1, H2-Mb1, H2-DMb1
PSMB9 (3) - 18.59 34319044 34324275 5232 NCBI Build 37 MGI:1346526 16912 Psmb9, Lmp-2, Lmp2
TAP1 (3) + 18.60 34324825 34333744 8920 NCBI Build 37 MGI:98483 21354 Abcb2, Ham-1, Ham1, MTP1, PSF-1, RING4, TAP, Tap-1
PSMB8 (3) + 18.61 34335344 34338211 2868 NCBI Build 37 MGI:1346527 282013 Psmb8, Psmb8, Lmp-7, Lmp7
TAP2 (3) + 18.62 34341025 34353266 12242 NCBI Build 37 MGI:98484 21355 ABC18, Abcb3, Ham-2, HAM2, Ham2, MTP2, PSF-2, PSF2, RING11, Tap-2, Y1
MH2 MH2-OB MH2-OB Major histocompatibility 2 O beta + 18.63 34375850 34382853 7004 NCBI Build 37 MGI:95925 15002 H2-DOB
MH2-AB MH2-AB Major histocompatibility 2 A beta + 18.64 34400185 34406355 6171 NCBI Build 37 MGI:103070 14961 H2-AB
MH2-AA MH2-AA Major histocompatibility 2 A alpha - 18.65 34419696 34424716 5021 NCBI Build 37 MGI:95895 14960 H2-AA
MH2-EB MH2-EB1 Major histocompatibility 2 E beta 1 + 18.66 34442843 34453144 10302 NCBI Build 37 MGI:95901 14969 H2-EB1
MH2-EB2 Major histocompatibility 2 E beta 2 + 18.67 34462610 34477174 14565 NCBI Build 37 MGI:95902 381091 H2-EB2
MH2-EA MH2-EA Major histocompatibility 2 E alpha - 18.70 34479878 34481588 1711 NCBI Build 37 MGI:95900 14968 H2-EA
MH1 MH1-D MH1-D1 Major histocompatibility 1 D1 + 19.09 35400039 35404440 4402 NCBI Build 37 MGI:95896 14964 H2-D1
MH1-D2 Major histocompatibility 1 D2 19.10 MGI:95897 110536 H2-D2
MH1-D3 Major histocompatibility 1 D3 19.11 MGI:95898 110553 H2-D3
MH1-D4 Major histocompatibility 1 D4 + 19.12 MGI:95899 14967 H2-D4
MH1-L MH1-L Major histocompatibility 1 L 19.13 MGI:95912 14980 H2-L
MH1-Q MH1-Q1 Major histocompatibility 1 Q1 + 19.14 35457507 35462364 4858 NCBI Build 37 MGI:95928 15006 H2-Q1
MH1-Q2 (5) Major histocompatibility 1 Q2 + 19.15 35400039 35404442 4404 NCBI Build 37 MGI:95931 15013 H2-Q2
MH1-Q3 Major histocompatibility 1 Q3 19.16 MGI:95932 110556 H2-Q3
MH1-Q4 Major histocompatibility 1 Q4 + 19.16 35516576 35521559 4984 NCBI Build 37 MGI:95933 15015 H2-Q4
MH1-Q5 Major histocompatibility 1 Q5 + 19.17 MGI:95934 15016 H2-Q5
MH1-Q6 Major histocompatibility 1 Q6 + 19.18 35561822 35565306 3485 NCBI Build 37 MGI:95935 110557 H2-Q6
MH1-Q7 Major histocompatibility 1 Q7 + 19.19 35576161 35580588 4428 NCBI Build 37 MGI:95936 15018 H2-Q7
MH1-Q8 (5) Major histocompatibility 1 Q8 + 19.20 35531044 35532577 1534 NCBI Build 37 MGI:95937 15019 H2-Q8
MH1-Q9 Major histocompatibility 1 Q9 + 19.21 35576100 35580588 4489 NCBI Build 37 MGI:95938 110558 H2-Q9
MH1-Q10 Major histocompatibility 1 Q10 + 19.22 35607034 35611508 4475 NCBI Build 37 MGI:95929 15007 H2-Q10
MH1-Q11 Major histocompatibility 1 Q11 19.23 MGI:95930 110620 H2-Q11, Qa-11, Qa11
MH1-Q13 Major histocompatibility 1 Q12 19.23 MGI:106050 110633 H2-Q13, Q13
MH1-Q12 Major histocompatibility 1 Q13 19.24 MGI:106051 110634 H2-Q12, Q12
MH1-Q14 Major histocompatibility 1 Q14 19.24 MGI:106049 110632 H2-Q14, Q14
MH1-Q15 Major histocompatibility 1 Q15 19.25 MGI:106048 110631 H2-Q15, Q15
MH1-M MH1-M10-PS1 (4) Major histocompatibility 1 M10-PS1 19.49 MGI:1276553 111251 H2-M10-PS1
MH1-T MH1-T Major histocompatibility 1 T 19.60 MGI:95940 111463 H2-T, H-2T
MH1-T24 Major histocompatibility 1 T24 - 19.72 36142640 36157505 14866 NCBI Build 37 MGI:95958 15042 H2-T24
MH1-T23 Major histocompatibility 1 T23 - 19.73 36166921 36169646 2726 NCBI Build 37 MGI:95957 15040 H2-T23
MH1-T22 Major histocompatibility 1 T22 - 19.74 36175352 36179692 4341 NCBI Build 37 MGI:95956 15039 H2-T22
MH1-T21 Major histocompatibility 1 T21 19.75 MGI:95955 110626 H2-T21
MH1-T20 Major histocompatibility 1 T20 19.76 MGI:95954 110625 H2-T20
MH1-T19 Major histocompatibility 1 T19 19.77 MGI:95952 110624 H2-T19
MH1-T18 (5) Major histocompatibility 1 T18 - 19.78 36322516 36327096 4581 NCBI Build 37 MGI:95950 15033 H2-T18
MH1-T17 Major histocompatibility 1 T17 - 19.79 36175354 36179687 4334 NCBI Build 37 MGI:95949 15032 H2-T17
MH1-T16 Major histocompatibility 1 T16 19.80 MGI:95948 110609 H2-T16
MH1-M MH1-M10-1 (5) Major histocompatibility 1 M10-1 - 19.84 36459803 36463100 3298 NCBI Build 37 MGI:1276522 14985 H2-M10-1
MH1-T MH1-T15 Major histocompatibility 1 T15 19.89 MGI:95947 110623 H2-T15
MH1-T14 Major histocompatibility 1 T14 19.90 MGI:95946 110608 H2-T14
MH1-T13 Major histocompatibility 1 T13 - 19.91 36216993 36221404 4412 NCBI Build 37 MGI:95945 15027 H2-T13
MH1-T12 Major histocompatibility 1 T12 19.92 MGI:95944 110622 H2-T12
MH1-T11 Major histocompatibility 1 T11 19.95 MGI:95943 110621 H2-T11
MH1-T10 Major histocompatibility 1 T10 - 19.96 36254035 36258389 4355 NCBI Build 37 MGI:95942 15024 H2-T10
MH1-T9 (5) Major histocompatibility 1 T9 - 19.97 36175354 36179687 4334 NCBI Build 37 MGI:95965 15051 H2-T9
MH1-T8 Major histocompatibility 1 T8 19.98 MGI:95964 110563 H2-T8
MH1-T7 Major histocompatibility 1 T7 19.99 MGI:95963 110562 H2-T7
MH1-T6 Major histocompatibility 1 T6 20.00 MGI:95962 110601 H2-T6
MH1-T18rs Major histocompatibility 1 T18rs 20.00 MGI:95951 110890 H2-T18rs, Tla-rs
MH1-T5 Major histocompatibility 1 T5 20.01 MGI:95961 110561 H2-T5
MH1-T4 Major histocompatibility 1 T4 20.02 MGI:95960 110560 H2-T4
MH1-T3 Major histocompatibility 1 T3 - 20.03 36322518 36327232 4715 NCBI Build 37 MGI:95959 15043 H2-T3
MH1-T2 Major histocompatibility 1 T2 20.04 MGI:95953 110559 H2-T2
MH1-T1 Major histocompatibility 1 T1 20.05 MGI:95941 15023 H2-T1
MH1-M MH1-M10-2 Major histocompatibility 1 M10-2 - 20.20 36421224 36423385 2162 NCBI Build 37 MGI:1276525 110697 H2-M10-2
MH1-M10-4 (5) Major histocompatibility 1 M10-4 - 20.20 36595862 36599279 3418 NCBI Build 37 MGI:1276527 110699 H2-M10-4
MH1-M10-PS2 (4) Major histocompatibility 1 M10-PS2 20.20 MGI:1276552 111249 H2-M10-PS2, H2-M10-ps2, 5.4H
MH1-M1 (5) Major histocompatibility 1 M1 - 20.23 36806953 36809164 2212 NCBI Build 37 MGI:95913 110554 H2-M1, H-2M1, Mb1
MH1-M7 (4) Major histocompatibility 1 M7 20.25 MGI:95919 14995 H2-M7, H-2M7, H2-M7-ps
MH1-M8 (4) Major histocompatibility 1 M8 20.26 MGI:95920 110555 H2-M8, H2-M8-ps
MH1-M9 (5) Major histocompatibility 1 M9 - 20.27 36777351 36779611 2261 NCBI Build 37 MGI:1276570 14997 H2-M9, /
MH1-M10-PS3 (4) Major histocompatibility 1 M10-PS3 20.27 MGI:1276551 111250 H2-M10-PS3, 7.2H, H2-M10-ps3
MH1-M10-3 Major histocompatibility 1 M10-3 - 20.295 36501950 36505361 3412 NCBI Build 37 MGI:1276524 110696 H2-M10-3, 5.3H
MH1-M11 Major histocompatibility 1 M11 + 36684020 36686199 2180 NCBI Build 37 MGI:2676637 224754 H2-M11
MH1-M10-5 Major histocompatibility 1 M10-5 + 20.30 36909855 36913179 3325 NCBI Build 37 MGI:1276526 110698 H2-M10-5
MH1-M6 (4) Major histocompatibility 1 M6 - 20.31 37106140 37108341 2202 NCBI Build 37 MGI:95918 14994 H2-M6
MH1-M4 (4) Major histocompatibility 1 M4 - 20.32 37117578 37117859 282 NCBI Build 37 MGI:95916 14992 H2-M4
MH1-M5 Major histocompatibility 1 M5 - 20.33 37121006 37126482 5477 NCBI Build 37 MGI:95917 14993 H2-M5
MH1-M3 Major histocompatibility 1 M3 + 20.38 37407179 37411430 4252 NCBI Build 37 MGI:95915 14991 H2-M3
MH1-M2 Major histocompatibility 1 M2 - 20.43 37617796 37620474 2679 NCBI Build 37 MGI:95914 14990 H2-M2
Legend:
  MH1 classical   MH2 classical
  MH1 nonclassical   MH2 nonclassical
IMGT notes:
  1. (1) Representative genes for classical and nonclassical MH1 and MH2 were defined in [1].
  2. (2) Gene previously assigned to the major histocompatibility cluster K, but not being a MH gene.
  3. (3) Gene that contribute to antigene presentation by MH.
  4. (4) Pseudogene
  5. (5) Divergence of chromosomal location of gene between cM and pb positions.
IMGT references:
  1. [1] Lefranc, M.-P. et al., Dev. Comp. Immunol., 29, 917-938 (2005). PMID: 15936075
See also:
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