IMGT MHC entry from gene to protein for Oncorhynchus mykiss MH2-DB1

IMGT gene name and definition

Chromosomal localization

Gene exon/intron organization

Gene table (Locus and genes)

Corresponding protein database accession numbers

Allele names IMGT/LIGM-DB UniProt Protein isoform
Accession numbers Sequence lengths (nt) Accession numbers Sequence lengths (AA)
Oncmyk MH2-DB1*01 U20943 741 Q31487 247 A
Oncmyk MH2-DB1*02 U20944 741 Q31488 247 A
DQ272134 216 Q2XPF1 72
FR688146 741 E0WN20 247
FR688148 E0WN22 247
Oncmyk MH2-DB1*03 U20946 651 Q31490 218 A
U20947 426 Q31491 142
Oncmyk MH2-DB1*03 or *04 or *23 DQ272159 216 Q2XPC6 72
Oncmyk MH2-DB1*04 AF296384 653 Q9GJJ2 218 A
FR688145 744 E0WN19 248
Oncmyk MH2-DB1*05 AF296385 653 Q9GJJ1 218 A
Oncmyk MH2-DB1*05 or *19 DQ272176 216 Q2XPA9 72
Oncmyk MH2-DB1*05 FR688139 741 E0WN13 247
FR688141 E0WN15 247
AF115533 642 Q9TNV8 214 A
Oncmyk MH2-DB1*06 AF296386 653 Q9GJJ0 218 A
Oncmyk MH2-DB1*06 or *20 or *25 or *26 DQ272164 216 Q2XPC1 72
Oncmyk MH2-DB1*06 FR688144 741 E0WN18 247
U34715 449 Q31498 149 A
Oncmyk MH2-DB1*07 AF296387 653 Q9GJI9 218 A
Oncmyk MH2-DB1*07 or *08 DQ272146 216 Q2XPD9 72
Oncmyk MH2-DB1*08 AF296388 653 Q9GJI8 218 A
Oncmyk MH2-DB1*09 AF296389 653 Q9GJI7 218 A
Oncmyk MH2-DB1*10 AF296390 653 Q9GJI6 218 A
AF115532 642 Q9TNV9 214
DQ272216 216 Q2XP69 72
FJ597508 180 B9VRW3 60
Oncmyk MH2-DB1*11 AF296391 653 Q9GJI5 218 A
DQ272190 216 Q2XP95 72
Oncmyk MH2-DB1*12 AF296392 653 Q9GJI4 218 A
Oncmyk MH2-DB1*13 AF296393 653 Q9GJI3 218 A
DQ272167 216 Q2X8 72
FR688147 741 E0WN21 247
Oncmyk MH2-DB1*13 or *18 FJ597509 180 B9VRW4 60
Oncmyk MH2-DB1*14 AF296394 653 Q9GJI2 218 A
DQ272189 216 Q2XP96 72
Oncmyk MH2-DB1*15 AF296395 653 Q9GJI1 218 A
U20945 426 Q31489 142
DQ272129 216 Q2XPF6 72
FJ597510 180 B9VRW5 60
Oncmyk MH2-DB1*16 AF296396 653 Q9GJI0 218 A
DQ272137 216 Q2XPE8 72
FJ597512 180 B9VRW7 60
Oncmyk MH2-DB1*17 AF296397 653 Q9GJH9 218 A
FJ597515 180 B9VRX0 60
Oncmyk MH2-DB1*18 JN836529 216 AFB74646 72
Oncmyk MH2-DB1*19 EF432116 216 A7KIQ2 72
Oncmyk MH2-DB1*20 AF115534 642 Q9TNV7 214 A
Oncmyk MH2-DB1*21 AF115535 642 Q9TNV6 214 A
DQ272161 216 Q2XPC4 72
Oncmyk MH2-DB1*22 JN836530 216 AFB74647 72
Oncmyk MH2-DB1*23 HQ839652 219 F8TBU8 73
Oncmyk MH2-DB1*24 U34714 449 Q31497 149 A
DQ272143 216 Q2XPE2 72
Oncmyk MH2-DB1*25 HQ839653 219 F8TBU9 73
Oncmyk MH2-DB1*26 AF115530 548 Q9TNW1 182 A
Oncmyk MH2-DB1*27 DQ272130 216 Q2XPF5 72
Oncmyk MH2-DB1*28 DQ272131 216 Q2XPF4 72
Oncmyk MH2-DB1*29 DQ272132 216 Q2XPF3 72
Oncmyk MH2-DB1*30 DQ272133 216 Q2XPF2 72
Oncmyk MH2-DB1*31 DQ272135 216 Q2XPF0 72
Oncmyk MH2-DB1*32 DQ272136 216 Q2XPE9 72
Oncmyk MH2-DB1*33 DQ272138 216 Q2XPE7 72
Oncmyk MH2-DB1*34 DQ272139 216 Q2XPE6 72
FJ597521 180 B9VRX6 60
Oncmyk MH2-DB1*35 DQ272140 216 Q2XPE5 72
Oncmyk MH2-DB1*36 DQ272141 216 Q2XPE4 72
Oncmyk MH2-DB1*37 DQ272142 216 Q2XPE3 72
Oncmyk MH2-DB1*38 DQ272144 216 Q2XPE1 72
Oncmyk MH2-DB1*39 DQ272145 216 Q2XPE0 72
Oncmyk MH2-DB1*40 DQ272147 216 Q2XPD8 72
Oncmyk MH2-DB1*41 DQ272148 216 Q2XPD7 72
FR688143 741 E0WN17 247
FJ597517 180 B9VRX2 60
Oncmyk MH2-DB1*42 DQ272149 216 Q2XPD6 72
Oncmyk MH2-DB1*43 DQ272150 216 Q2XPD5 72
Oncmyk MH2-DB1*44 DQ272151 216 Q2XPD4 72
FR688140 741 E0WN14 247
FR688142 E0WN16 247
Oncmyk MH2-DB1*45 DQ272152 216 Q2XPD3 72
Oncmyk MH2-DB1*46 DQ272153 216 Q2XPD2 72
Oncmyk MH2-DB1*47 DQ272154 216 Q2XPD1 72
Oncmyk MH2-DB1*48 DQ272155 216 Q2XPD0 72
Oncmyk MH2-DB1*49 AY273808 555 Q7YQA1 185
DQ272156 216 Q2XPC9 72
Oncmyk MH2-DB1*50 DQ272157 216 Q2XPC8 72
Oncmyk MH2-DB1*51 DQ272158 216 Q2XPC7 72
Oncmyk MH2-DB1*52 DQ272160 216 Q2XPC5 72
Oncmyk MH2-DB1*53 DQ272162 216 Q2XPC3 72
Oncmyk MH2-DB1*54 DQ272163 216 Q2XPC2 72
FJ597519 180 B9VRX4 60
Oncmyk MH2-DB1*55 DQ272165 216 Q2XPC0 72
Oncmyk MH2-DB1*56 DQ272166 216 Q2X9 72
Oncmyk MH2-DB1*57 DQ272168 216 Q2X7 72
Oncmyk MH2-DB1*58 DQ272169 216 Q2X6 72
Oncmyk MH2-DB1*59 DQ272170 216 Q2X5 72
Oncmyk MH2-DB1*60 DQ272171 216 Q2X4 72
Oncmyk MH2-DB1*61 DQ272172 216 Q2X3 72
Oncmyk MH2-DB1*62 DQ272173 216 Q2X2 72
Oncmyk MH2-DB1*63 DQ272174 216 Q2X1 72
FJ597518 183 B9VRX3 61
Oncmyk MH2-DB1*64 DQ272175 216 Q2X0 72
Oncmyk MH2-DB1*65 DQ272177 216 Q2XPA8 72
Oncmyk MH2-DB1*66 DQ272178 216 Q2XPA7 72
Oncmyk MH2-DB1*67 DQ272179 216 Q2XPA6 72
Oncmyk MH2-DB1*68 DQ272180 216 Q2XPA5 72
Oncmyk MH2-DB1*69 DQ272181 216 Q2XPA4 72
Oncmyk MH2-DB1*70 DQ272182 216 Q2XPA3 72
Oncmyk MH2-DB1*71 DQ272183 216 Q2XPA2 72
Oncmyk MH2-DB1*72 DQ272184 216 Q2XPA1 72
Oncmyk MH2-DB1*73 DQ272185 216 Q2XPA0 72
Oncmyk MH2-DB1*74 DQ272186 216 Q2XP99 72
Oncmyk MH2-DB1*75 DQ272187 216 Q2XP98 72
Oncmyk MH2-DB1*76 DQ272188 216 Q2XP97 72
Oncmyk MH2-DB1*77 EF432117 210 A7KIQ3 70
Oncmyk MH2-DB1*78 DQ272191 216 Q2XP94 72
Oncmyk MH2-DB1*79 DQ272192 216 Q2XP93 72
Oncmyk MH2-DB1*80 DQ272193 216 Q2XP92 72
Oncmyk MH2-DB1*81 DQ272194 216 Q2XP91 72
Oncmyk MH2-DB1*82 DQ272195 216 Q2XP90 72
Oncmyk MH2-DB1*83 DQ272196 216 Q2XP89 72
Oncmyk MH2-DB1*84 DQ272197 216 Q2XP88 72
Oncmyk MH2-DB1*85 DQ272198 216 Q2XP87 72
Oncmyk MH2-DB1*86 DQ272199 216 Q2XP86 72
Oncmyk MH2-DB1*87 DQ272200 216 Q2XP85 72
Oncmyk MH2-DB1*88 DQ272201 216 Q2XP84 72
Oncmyk MH2-DB1*89 DQ272202 216 Q2XP83 72
Oncmyk MH2-DB1*90 DQ272203 216 Q2XP82 72
Oncmyk MH2-DB1*91 DQ272204 216 Q2XP81 72
Oncmyk MH2-DB1*92 DQ272205 216 Q2XP80 72
Oncmyk MH2-DB1*93 DQ272206 216 Q2XP79 72
Oncmyk MH2-DB1*94 DQ272207 216 Q2XP78 72
Oncmyk MH2-DB1*95 DQ272208 216 Q2XP77 72
Oncmyk MH2-DB1*96 DQ272209 216 Q2XP76 72
Oncmyk MH2-DB1*97 DQ272210 216 Q2XP75 72
Oncmyk MH2-DB1*98 DQ272211 216 Q2XP74 72
Oncmyk MH2-DB1*99 DQ272212 216 Q2XP73 72
Oncmyk MH2-DB1*100 DQ272213 216 Q2XP72 72
Oncmyk MH2-DB1*101 DQ272214 216 Q2XP71 72
Oncmyk MH2-DB1*102 DQ272215 216 Q2XP70 72
Oncmyk MH2-DB1*103 EF432115 216 A7KIQ1 72
Oncmyk MH2-DB1*104 JN836531 216 AFB74648 72
Oncmyk MH2-DB1*105 JN836532 216 AFB74649 72
Oncmyk MH2-DB1*106 JN836533 216 AFB74650 72
Oncmyk MH2-DB1*107 JN836534 216 AFB74651 72
Oncmyk MH2-DB1*108 JN836535 216 AFB74652 72
Oncmyk MH2-DB1*109 JN836536 216 AFB74653 72
Oncmyk MH2-DB1*110 JN836537 216 AFB74654 72
Oncmyk MH2-DB1*111 JN836538 216 AFB74655 72
Oncmyk MH2-DB1*112 JN836539 216 AFB74656 72
Oncmyk MH2-DB1*113 JN836540 216 AFB74657 72
Oncmyk MH2-DB1*114 FJ597507 180 B9VRW2 60
Oncmyk MH2-DB1*115 FJ597511 180 B9VRW6 60
Oncmyk MH2-DB1*116 FJ597513 180 B9VRW8 60
Oncmyk MH2-DB1*117 FJ597514 180 B9VRW9 60
Oncmyk MH2-DB1*118 FJ597516 180 B9VRX1 60
Oncmyk MH2-DB1*119 FJ597520 180 B9VRX5 60

Genomic sequence

Coding region sequence

The coding region (CODING-REGION) sequence starts from INIT-CODON (or its encoded amino acid) to STOP-CODON (not included).
The nucleotide sequence is extracted from cDNA (c) sequences and/or is built by artificial exon joining from genomic DNA (g) sequences. The amino acid sequence is the translation of the nucleotide sequence.

Oncmyk MH2-DB1*01: U20943(c)

Coding region structure

coding region structure fish MH2-DB1

Nucleotide sequence

1        atgtcgatgc caattgcctt ctacatttgc ctgaccctgt tatggtccat attctctgga

61       acagatggat attttgaaca ggttgtgaga cagtgtcgat actcctcaaa ggacctgcat

121      ggtatagagt ttatagactc ttatgttttc aataaggctg aacatgtcag attcaacagc

181      actgtgggga ggtatgttgg atacactgaa catggtctga agaatgcaga agcatggaac

241      agtgatgctg ggatcctggg tcaagagcag gcggagctgg agcgttactg taagcctagc

301      gctgctatcg actacagcgc catactggac aagacagttg agccccatgt cagactgagc

361      tcagtgactc cccccagtgg cagacaccct gccatgctga tgtgcagcgc ctatgacttc

421      taccccaaac aaatcagagt gacctggctg agggacggac gtgaggtgaa atctgatgtg

481      acctccactg aggagctggc taacggggac tggtactacc agatccactc ccacctggag

541      tacacaccca agtctggaga gaagatctcc tgtatggtgg agcacatcag cctcactgag

601      cccatgatgt atcactggga cccgtccctg cctgaggctg agaggaataa gatagcgatc

661      ggtgcatctg gtctggtgct gggaaccatc ttagcattag caggactgat ctactacaag

721      aagaagtctt ctggggtgct c
Nucleotide sequence in FASTA format (without gaps) Oncmyk MH2-DB1*01

Amino acid sequence

1        MSMPIAFYIC LTLLWSIFSG TDGYFEQVVR QCRYSSKDLH GIEFIDSYVF NKAEHVRFNS

61       TVGRYVGYTE HGLKNAEAWN SDAGILGQEQ AELERYCKPS AAIDYSAILD KTVEPHVRLS

121      SVTPPSGRHP AMLMCSAYDF YPKQIRVTWL RDGREVKSDV TSTEELANGD WYYQIHSHLE

181      YTPKSGEKIS CMVEHISLTE PMMYHWDPSL PEAERNKIAI GASGLVLGTI LALAGLIYYK

241      KKSSGVL
Amino acid sequence in FASTA format (without gap) Oncmyk MH2-DB1*01

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