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Other B7 Family entries

IMGT RPI entry from gene to protein for Mus musculus B7H2

Citing IMGT RPI entry for B7H2

Duprat, E. et al. IMGT standardization for alleles and mutations of the V-LIKE-DOMAINs and C-LIKE-DOMAINs of the immunoglobulin superfamily, Recent Research Developments in Human Genetics, 2, 111-136 (2004) pdf with permission from Research Signpost

IMGT gene name and definition

Chromosomal localization

Gene exon/intron organization

B7H2 Gene exon/intron organization

Legend:

Number of alleles: 2

IMGT reference alleles

Allele names Gene functionality IMGT reference sequences
Exons Accession numbers Molecule type
B7H2*01 F EX1-7 AF394451[1] cDNA
B7H2*02 F EX1-6, 8 AF199027 [2] cDNA (1) splicing B

IMGT reference sequences (in FASTA format) for the allele(s): B7H2*01 to B7H2*02

Other sequences from the literature

Allele names Gene functionality IMGT reference sequences
Exons Accession numbers Molecule type
B7H2*02 F EX1-6,8 AF216747 cDNA splicing B
BC029227 cDNA splicing B
AK041421 cDNA splicing B
AK136074 cDNA splicing B
NM_015790 cDNA splicing B

Corresponding protein database accession numbers

Allele names Accession numbers Number of amino acids Protein isoform
Nucleotide databases Protein databases
B7H2*01 AF394451 347 aa 1
NM_015790 NP_056605 322 aa 2
IMGT notes:
  1. (1) Splicing B (322 aa). No EX7. In EX4 a48>g, a295>g; H99>R, positions according to the IMGT unique numbering for the C-DOMAIN and C-LIKE-DOMAIN.
IMGT references:
  1. [1] Ling V. et al. The Journal of Immunology, 166, 7300-7308(2001). PMID: 11390480
  2. [2] Ling V. et al. The Journal of Immunology, 164, 1653-1657(2000). PMID: 10657606

Genomic sequence

Coding region sequence

The coding region (CODING-REGION) sequence starts from INIT-CODON (or its encoded amino acid) to STOP-CODON (not included).
The nucleotide sequence is extracted from cDNA (c) sequences and/or is built by artificial exon joining from genomic DNA (g) sequences. The amino acid sequence is the translation of the nucleotide sequence.

B7H2*01: AF199028(c)

Nucleotide sequence

1        atgcagctaa agtgtccctg ttttgtgtcc ttgggaacca ggcagcctgt ttggaagaag

61       ctccatgttt ctagcgggtt cttttctggt cttggtctgt tcttgctgct gttgagcagc

121      ctctgtgctg cctctgcaga gactgaagtc ggtgcaatgg tgggcagcaa tgtggtgctc

181      agctgcattg acccccacag acgccatttc aacttgagtg gtctgtatgt ctattggcaa

241      atcgaaaacc cagaagtttc ggtgacttac tacctgcctt acaagtctcc agggatcaat

301      gtggacagtt cctacaagaa caggggccat ctgtccctgg actccatgaa gcagggtaac

361      ttctctctgt acctgaagaa tgtcacccct caggataccc aggagttcac atgccgggta

421      tttatgaata cagccacaga gttagtcaag atcttggaag aggtggtcag gctgcgtgtg

481      gcagcaaact tcagtacacc tgtcatcagc acctctgata gctccaaccc aggccaggaa

541      cgtacctaca cctgcatgtc caagaatggc tacccagagc ccaacctgta ttggatcaac

601      acaacggaca atagcctaat agacacggct ctgcagaata acactgtcta cttgaacaag

661      ttgggcctgt atgatgtaat cagcacatta aggctccctt ggacatctca tggggatgtt

721      ctgtgctgcg tagagaatgt ggctctccac cagaacatca ctagcattag ccaggcagaa

781      agtttcactg gaaataacac aaagaaccca caggaaaccc acaataatga gttaaaagtc

841      cttgtccccg tccttgctgt actggcggca gcggcattcg tttccttcat catatacaga

901      cgcacgcgtc cccaccgaag ctatacagga cccaagactg tacagcttga acttacagac

961      acttgggctc cggtccccta ccaggactat ttgattccaa gatatttgat gtctccatgc

1021     ctcaaaacac gtggtttacc ataa
Nucleotide sequence in FASTA format (without gaps) B7H2*01

Amino acid sequence

1        MQLKCPCFVS LGTRQPVWKK LHVSSGFFSG LGLFLLLLSS LCAASAETEV GAMVGSNVVL

61       SCIDPHRRHF NLSGLYVYWQ IENPEVSVTY YLPYKSPGIN VDSSYKNRGH LSLDSMKQGN

121      FSLYLKNVTP QDTQEFTCRV FMNTATELVK ILEEVVRLRV AANFSTPVIS TSDSSNPGQE

181      RTYTCMSKNG YPEPNLYWIN TTDNSLIDTA LQNNTVYLNK LGLYDVISTL RLPWTSHGDV

241      LCCVENVALH QNITSISQAE SFTGNNTKNP QETHNNELKV LVPVLAVLAA AAFVSFIIYR

301      RTRPHRSYTG PKTVQLELTD TWAPVPYQDY LIPRYLMSPC LKTRGLP*
Amino acid sequence in FASTA format (without gap) B7H2*01

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