IMGT Repertoire (IG and TR)

Alignment of alleles: western lowland gorilla (Gorilla gorilla gorilla) TRGV9

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.

Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

Dots indicate gaps according to the IMGT unique numbering.
Blanks at the 5' and/or 3' end indicate partial sequences.
Asterisk (*) in the sequence indicate a STOP-CODON.
Letters in red correspond to amino acids which are polymorphic in the other alleles.
Colours are according to Color menu for mutations, Color menu for sequence alignments and Color menu for splicing types.
The nucleotide (s) in bold and colored in purple (splicing frame 1) or green (splicing frame 2) from the DONOR splice site are added at the beginning of the following exon in order to obtain and to complete the first CODON of the DOMAIN or REGION resulting from the splicing site. These first CODONs are in bold and colored in purple (splicing frame 1) or green (splicing frame 2)
N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown in green

Clicking on the allele name gives access to the IMGT/GENE-DB.
Clicking on the accession number gives access to the IMGT/LIGM-DB.

                                                                                                                            
                                            
                                             1   2   3   4   5   6   7   8   9   10  11  12  13  14  15  16  17  18  19  20 
                                             A   G   H   L   E   Q   P   Q   I   S   S   T   K   M   L   S   K   T   A   R  
  IMGT000102 TRGV9*01 ORF V-REGION gDNA     gca ggt cac cta gag caa cct caa att tcc agt act aaa atg ctg tca aaa aca gcc cgc 

                                                                                                 T                          
  IMGT000103 TRGV9*02 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- --- --- --- -c- --- --- --- --- --- --- 



                                                                    ___________________CDR1-IMGT____________________        
                                            
                                             21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40 
                                             L   E   C   V   V   S   G   V   T   I                   S   A   T   S   V   Y  
  IMGT000102 TRGV9*01 ORF V-REGION gDNA     ctg gaa tgt gtg gtg tct gga gta aca att ... ... ... ... tct gca aca tct gta tat 

                                                                                                                            
  IMGT000103 TRGV9*02 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- --- ... ... ... ... --- --- --- --- --- --- 



                                                                                                            _______________C
                                            
                                             41  42 42A  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59 
                                             W   Y       R   E   R   P   G   E   V   I   Q   F   L   V   S   I   S   Y   D  
  IMGT000102 TRGV9*01 ORF V-REGION gDNA     tgg tat ... cga gaa aga cct ggt gaa gtc ata cag ttc ctg gtg tcc att tca tat gac 

                                                                                                                     H      
  IMGT000103 TRGV9*02 ORF V-REGION gDNA     --- --- ... --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- c-- --- 



                                            DR2-IMGT________________                                                        
                                            
                                             60  61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79 
                                                         G   T   V   R   K   E   S   G   I   P   S   G   K   F   E   V   D  
  IMGT000102 TRGV9*01 ORF V-REGION gDNA     ... ... ... ggc aca gtc aga aag gaa tcc ggc att ccg tca ggc aaa ttt gag gtg gat 

                                                                                                                            
  IMGT000103 TRGV9*02 ORF V-REGION gDNA     ... ... ... --- --- --- --- --- --- --- --- --- --a --- --- --- --- --- --- --- 



                                                                                                                            
                                            
                                             80  81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 
                                             R   I   P   E   T   S   T   S   T   L   T   I   H   N   V   E   K   Q   D   I  
  IMGT000102 TRGV9*01 ORF V-REGION gDNA     agg ata cct gaa acg tct aca tcc act ctc acc att cac aat gta gag aaa cag gac ata 

                                                             M                                                              
  IMGT000103 TRGV9*02 ORF V-REGION gDNA     --- --- --- --- -t- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- 



                                                                _____CDR3-IMGT______
                                            
                                            100 101 102 103 104 105 106 107 108 109 
                                             A   T   Y   Y   C   A   L   W   E   V  
  IMGT000102 TRGV9*01 ORF V-REGION gDNA     gct acc tac tac tgt gcc ttg tgg gag gtg 

                                                                                    
  IMGT000103 TRGV9*02 ORF V-REGION gDNA     --- --- --- --- --- --- --- --- --- ---

This alignment of allele is generated by IMGT/OutilAllele (Mehdi Yousfi, Chantal Ginestoux, Perrine Pégorier and Patrice Duroux).

Created:: 27/04/2022
Last updated:: 08/11/2022
Authors:: Joanna Maria Rosinska, Chahrazed Debbagh