IMGT Repertoire (IG and TR)


Gene table: chicken (Gallus gallus) IGLC

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

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IMGT gene name IMGT allele name Fct Serological
markers
Chromosomal
localization
T Pr IMGT/LIGM-DB locus reference sequences IMGT/LIGM-DB sequences from the literature
Breed Clone names Exons Accession numbers Positions in the sequence Secondary accession numbers Breed Clone names Accession numbers Positions in the sequence
IGLC IGLC*01 F 15 + Red Jungle fowl CM000107.5 C-REGION IMGT000008 MAP 34844..35154 M24403 [1] 4521..4831
M33053 [2] 69..379
X04768 [3] 69..379

MAP: Mapped reference sequences.

IMGT references:
  1. [1] McCormack W.T., et al. Cell 56(5):785-791 (1989). PMID:2493991
  2. [2] Parvari R., et al. Prog. Clin. Biol. Res. 238:15-26 (1987). PMID:3110791
  3. [3] Parvari R., et al. EMBO J. 6(1):97-102 (1987). PMID:3107981
Created:
18/06/2018
Last updated:
22/09/2023
Authors:
Perrine Pégorier