IMGT Repertoire (IG and TR)

Fct: FUNCTIONALITY
- F: Functional
- P: Pseudogene
- ORF: Open Reading Frame
T: Transcribed
Pr: Translated into protein

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name to get the corresponding IMGT/GENE-DB entry,
IMGT allele name to see the corresponding Alignments of alleles,
accession number to get the corresponding IMGT/LIGM-DB entry.

IMGT gene name	IMGT allele name	Fct	Chromosomal localization	T	Pr	IMGT/LIGM-DB locus reference sequences						IMGT/LIGM-DB sequences from the literature
IMGT gene name	IMGT allele name	Fct	Chromosomal localization	T	Pr	Isolate	Clone names	Exons	Accession numbers	Positions in the sequence	Secondary accession numbers	Breed		Clone names	Accession numbers	Positions in the sequence
	TRGC1	TRGC1*01	F			3	+		AG07107	CM014338.1	EX1	IMGT000059	MAP	93710..94039
											EX2	IMGT000059	MAP	97226..97273
											EX3	IMGT000059	MAP	99176..99315
	TRGC2	TRGC2*01	F			3	+		AG07107	CM014338.1	EX1	IMGT000059	MAP	122885..123214
											EX2T	IMGT000059	MAP	127544..127591
											EX2R	IMGT000059	MAP	130360..130407
											EX2	IMGT000059	MAP	133111..133158
											EX3	IMGT000059	MAP	135054..135193

MAP: Mapped reference sequences.

More information:

See also (IMGT Scientific chart):

Created:: 04/12/2019
Last updated:: 22/09/2023
Authors:: Viviane Nguefack Ngoune

IMGT Repertoire (IG and TR)

Gene table: Rhesus monkey (Macaca mulatta) TRGC