IMGT Repertoire (IG and TR)

Fct: FUNCTIONALITY
- F: Functional
- P: Pseudogene
- ORF: Open Reading Frame
R: Rearranged
T: Transcribed
Pr: Translated into protein

"+" or "-" indicates if the gene sequences have been found (+) or not been found (-) rearranged (R), transcribed (T) and/or translated into protein (Pr). Arbitrarily that information is shown on the first line of each gene when the data have been confirmed by several studies.

Functionality is shown between parentheses, (F) and (P), when the accession number refers to rearranged genomic DNA or cDNA and the corresponding germline gene has not yet been isolated.
Functionality is shown between brackets, [F] and [P], when the accession number refers to genomic DNA, but not known as being germline or rearranged.

Click on:

IMGT gene name to get the corresponding IMGT/GENE-DB entry,
IMGT allele name to see the corresponding Alignments of alleles,
accession number to get the corresponding IMGT/LIGM-DB entry.

Due to the poor quality of the Btau3.1 assembly, only clearly identified genes by comparison to IMGT000049 (ARS-UCD1.2 assembly) are annotated. Moreover some duplications such as TRAV4 in Btau3.1_ChrUn.139, TRAV24-6 in Btau3.1_ChrUn.2578, TRAV9-1, TRAV13-1 and TRAV12-2 in Btau3.1_ChrUn.298 and TRAV5, TRAV6, TRAV9-4, TRAV9-5, TRAV9-6, TRAV13-3, TRAV13-4, TRAV14-3, TRAV14-4 and TRAV43-3 in Btau3.1_ChrUn.41 may result from assemblies errors.
Owing to the difficulties linked to the assemblies, IMGT genes and alleles assignment was not done to previous annotations of the bovine TRA/TRD locus [3,4], made from Btau4.0 and UMD3.1 assemblies, respectively.

This annotation was based on the following articles:

Reinink P, Van Rhijn I. The bovine T cell receptor alpha/delta locus contains over 400 V genes and encodes V genes without CDR2. Immunogenetics. 2009 Jul;61(7):541-9. doi: 10.1007/s00251-009-0384-9. Epub 2009 Jul 2. PMID: 19568741.
Connelley TK, Degnan K, Longhi CW, Morrison WI. Genomic analysis offers insights into the evolution of the bovine TRA/TRD locus. BMC Genomics. 2014 Nov 19;15(1):994. doi: 10.1186/1471-2164-15-994. PMID: 25408163.

IMGT subgroup	IMGT gene name	IMGT allele name	Fct		Chromosomal localization	R	T	Pr	IMGT/LIGM-DB locus reference sequences								IMGT/LIGM-DB sequences from the literature
IMGT subgroup	IMGT gene name	IMGT allele name	Fct		Chromosomal localization	R	T	Pr	Breed	Clone names	Accession numbers	Positions in the sequence (L-V-GENE-UNIT)	Secondary accession numbers				Breed		Clone names	Accession numbers	Positions in the sequence (L-V-GENE-UNIT)
TRAV1	TRAV1	TRAV1*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	10001..10667			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(534682..535348)
TRAV2	TRAV2-1	TRAV2-1*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	84032..84522			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(460821..461311)
	TRAV2-2	TRAV2-2*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	101406..101889			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(443453..443936)
	TRAV2-3	TRAV2-3*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	122906..123400			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(421944..422438)
	TRAV2-4	TRAV2-4*01	P	(3)		10				Hereford	CM008177.2		IMGT000049			MAP	141947..142435			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(402907..403395)
	TRAV2-5	TRAV2-5*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	164003..164493			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(380935..381425)
	TRAV2-6	TRAV2-6*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	189456..189944			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(355481..355969)
	TRAV2-7	TRAV2-7*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	216945..217433			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(327986..328474)
TRAV3	TRAV3-1	TRAV3-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	91077..91543			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(453800..454266)
	TRAV3-2	TRAV3-2*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	108247..108713			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(436629..437095)
	TRAV3-3	TRAV3-3*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	130221..130692
	TRAV3-3	TRAV3-3*02	P	(4)		10				Hereford			Btau3.1_Chr10.28	[1]	(54,55)		complement(414650..415123)
	TRAV3-4	TRAV3-4*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	149038..149504			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(395924..396390)
	TRAV3-5	TRAV3-5*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	171015..171486			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(373942..374413)
	TRAV3-6	TRAV3-6*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	198544..199015			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(346409..346880)
	TRAV3-7	TRAV3-7*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	222300..222771			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(322648..323119)
TRAV4	TRAV4	TRAV4*01	P	(5)		10				Hereford	CM008177.2		IMGT000049			MAP	471723..471999	(57)		Hereford		Btau3.1_ChrUn.139	[1]	(54)	22058..22334	(57)
TRAV5	TRAV5	TRAV5*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	complement(2852338..2852888)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	complement(601337..601887)
		TRAV5*02	F							Hereford			Btau3.1_ChrUn.129	[1]	(54,55)		26193..26745			Hereford		Btau3.1_ChrUn.41	[1]	(54)	327342..327894
		TRAV5*02	F							Hereford			Btau3.1_ChrUn.129	[1]	(54,55)		26193..26745			Hereford		Btau3.1_ChrUn.857	[1]	(54)	93907..94459
		TRAV5*03	F							Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		complement(144975..145527)
TRAV6	TRAV6	TRAV6*01	P	(6)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2843182..2843734)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	complement(135797..136349)
TRAV6	TRAV6	TRAV6*02	P	(6)						Hereford			Btau3.1_ChrUn.857	[1]	(54,55)		103077..103629
TRAV8	TRAV8-1	TRAV8-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	317292..317780
		TRAV8-1*02	F			10				Hereford			Btau3.1_Chr10.28	[1]	(54,55)		complement(265567..266055)			Hereford		Btau3.1_ChrUn.129	[1]	(54)	282060..282548
		TRAV8-1*03	F				+	+		Hereford			Btau3.1_ChrUn.298	[1]	(54,55)		11006..11494
	TRAV8-2	TRAV8-2*01	P	(7)		10				Hereford	CM008177.2		IMGT000049			MAP	433950..434425
	TRAV8-3	TRAV8-3*01	P	(7)		10				Hereford	CM008177.2		IMGT000049			MAP	1913633..1914113
		TRAV8-3*02	P	(7)						Hereford			Btau3.1_ChrUn.1227	[1]	(54,55)		complement(52252..52732)
		TRAV8-3*03	P	(7)						Hereford			Btau3.1_ChrUn.2188	[1]	(54,55)		21609..22089
	TRAV8-4	TRAV8-4*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2318915..2319419)					AY227782	[2]		97999..98503
	TRAV8-5	TRAV8-5*01	P	(8)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2337645..2338125)
TRAV9	TRAV9-1	TRAV9-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	480956..481458
		TRAV9-1*02	F							Hereford			Btau3.1_ChrUn.139	[1]	(54,55)		31296..31798			Hereford		Btau3.1_ChrUn.298	[1]	(54)	complement(70182..70684)
		TRAV9-1*03	F							Hereford			Btau3.1_ChrUn.298	[1]	(54,55)		72137..72640
	TRAV9-2	TRAV9-2*01	P	(9)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2591336..2591833)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(131192..131689)
	TRAV9-3	TRAV9-3*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2613911..2614412)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(153312..153813)
	TRAV9-4	TRAV9-4*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2789726..2790221)			Hereford		Btau3.1_ChrUn.41	[1]	(10,54)	390437..390931
	TRAV9-5	TRAV9-5*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2808799..2809298)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	complement(100664..101163)
	TRAV9-6	TRAV9-6*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2835335..2835839)
	TRAV9-6	TRAV9-6*02	F							Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		complement(127931..128435)			Hereford		Btau3.1_ChrUn.857	[1]	(54)	110156..110660
TRAV10	TRAV10-1	TRAV10-1*01	P	(11)		10				Hereford	CM008177.2		IMGT000049			MAP	491414..>491602	(57)		Hereford		Btau3.1_ChrUn.139	[1]	(54)	41759..>41947	(57)
	TRAV10-2	TRAV10-2*01	P	(12)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2586300..2586909)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(126154..126763)
	TRAV10-3	TRAV10-3*01	ORF	(13)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2784619..2785228)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	395430..396039
TRAV11	TRAV11-1	TRAV11-1*01	P	(14)		10				Hereford	CM008177.2		IMGT000049			MAP	492368..492938			Hereford		Btau3.1_ChrUn.139	[1]	(54)	42713..43283
	TRAV11-2	TRAV11-2*01	P	(15)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2584138..2585355)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(123992..125209)
	TRAV11-3	TRAV11-3*01	P	(16)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2783093..2783666)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	396992..397565
TRAV12	TRAV12-1	TRAV12-1*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	504962..505549
	TRAV12-2	TRAV12-2*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2571727..2572313)
		TRAV12-2*02	F							Hereford			Btau3.1_ChrUn.221	[1]	(54,55)		complement(111556..112147)
		TRAV12-2*03	F							Hereford			Btau3.1_ChrUn.298	[1]	(54,55)		107579..108166
	TRAV12-3	TRAV12-3*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2773481..2774073)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	406607..407199
TRAV13	TRAV13-1	TRAV13-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	485559..486105			Hereford		Btau3.1_ChrUn.139	[1]	(54)	35903..36449
		TRAV13-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	485559..486105			Hereford		Btau3.1_ChrUn.298	[1]	(54)	82256..82802
		TRAV13-1*02	F							Hereford			Btau3.1_ChrUn.298	[1]	(54,55)		76776..77322
	TRAV13-2	TRAV13-2*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2603842..2604391)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(143206..143755)
	TRAV13-3	TRAV13-3*01	P	(4)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2801969..2802510)
		TRAV13-3*02	P	(2)						Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		complement(93806..94352)
		TRAV13-3*03	P	(2)						Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		378476..379017
	TRAV13-4	TRAV13-4*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2831669..2832207)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	complement(123364..123903)
		TRAV13-4*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2831669..2832207)			Hereford		Btau3.1_ChrUn.857	[1]	(54)	114688..115227
		TRAV13-4*02	F							Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		348962..349501
TRAV14	TRAV14-1	TRAV14-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2599598..2600145)
	TRAV14-2	TRAV14-2*01	P	(4)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2633448..2634567)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(193985..195104)
	TRAV14-3	TRAV14-3*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2798254..2798801)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	382181..382728
		TRAV14-3*02	P	(16)						Hereford			Btau3.1_ChrUn.129	[1]	(54,55)		113937..114480
		TRAV14-3*03	F							Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		complement(90090..90637)
	TRAV14-4	TRAV14-4*01	ORF	(17)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2826272..2827393)
	TRAV14-4	TRAV14-4*02	ORF	(17)						Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		complement(117956..119086)			Hereford		Btau3.1_ChrUn.857	[1]	(54)	119505..120635
TRAV16	TRAV16	TRAV16*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	523406..523887			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(335248..335729)
TRAV17	TRAV17-1	TRAV17-1*01	P	(16)		10				Hereford	CM008177.2		IMGT000049			MAP	529167..529954			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(329180..329967)
	TRAV17-2	TRAV17-2*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2311425..2312215)
	TRAV17-2	TRAV17-2*02	F				+	+		Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		complement(14526..15316)
	TRAV17-3	TRAV17-3*01	P	(14)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2763457..2764245)			Hereford		Btau3.1_ChrUn.41	[1]	(54,56)	416435..417225
TRAV18	TRAV18-1	TRAV18-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	542353..542866			Hereford		Btau3.1_ChrUn.129	[1]	(54)	215777..216290
		TRAV18-1*02	ORF	(18)						Hereford			Btau3.1_ChrUn.221	[1]	(54,55)		complement(316139..316653)
		TRAV18-1*03	F							Hereford			Btau3.1_ChrUn.298	[1]	(54,55)		134738..135258
	TRAV18-2	TRAV18-2*01	ORF	(18)		10				Hereford	CM008177.2		IMGT000049			MAP	588352..588866
	TRAV18-3	TRAV18-3*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2300116..2300628)
	TRAV18-3	TRAV18-3*02	P	(2)						Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		complement(3231..3743)
	TRAV18-4	TRAV18-4*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2550805..2551325)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(90298..90818)
	TRAV18-5	TRAV18-5*01	ORF	(18)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2751808..2752329)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	428357..428878
TRAV19	TRAV19-1	TRAV19-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	252152..252782
	TRAV19-2	TRAV19-2*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	292463..293110			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(291965..292612)
	TRAV19-3	TRAV19-3*01	P	(19)		10				Hereford	CM008177.2		IMGT000049			MAP	631666..632300			Hereford		Btau3.1_ChrUn.139	[1]	(54,56)	288370..289003
		TRAV19-3*02	F				+	+		Hereford			Btau3.1_ChrUn.129	[1]	(54,55)		256770..257400
		TRAV19-3*03	ORF	(20)						Hereford			Btau3.1_ChrUn.298	[1]	(54,55)		170038..170672
	TRAV19-4	TRAV19-4*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2526705..2527361)
	TRAV19-4	TRAV19-4*02	P	(2)						Hereford			Btau3.1_ChrUn.221	[1]	(54,55)		complement(65255..65956)
TRAV20	TRAV20-1	TRAV20-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	260504..261040
	TRAV20-1	TRAV20-1*02	F							Hereford			Btau3.1_ChrUn.129	[1]	(54,55)		265889..266424
	TRAV20-2	TRAV20-2*01	P	(21)		10				Hereford	CM008177.2		IMGT000049			MAP	280619..280878	(57)
	TRAV20-3	TRAV20-3*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	300830..301363			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(283707..284240)
	TRAV20-4	TRAV20-4*01	ORF	(1)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2518379..2518920)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(56922..57463)
TRAV21	TRAV21-1	TRAV21-1*01	ORF	(22)		10				Hereford	CM008177.2		IMGT000049			MAP	268476..269049
	TRAV21-2	TRAV21-2*01	P	(23)		10				Hereford	CM008177.2		IMGT000049			MAP	288414..289004
	TRAV21-3	TRAV21-3*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	308831..309402
		TRAV21-3*02	F			10				Hereford			Btau3.1_Chr10.28	[1]	(54,55)		complement(275668..276241)
		TRAV21-3*03	F							Hereford			Btau3.1_ChrUn.129	[1]	(54,55)		273766..274337			Hereford		Btau3.1_ChrUn.298	[1]	(54)	2517..3088
	TRAV21-4	TRAV21-4*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2510059..2510631)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(48601..49173)
TRAV22	TRAV22-1	TRAV22-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	321637..322194
		TRAV22-1*02	ORF	(20)		10				Hereford			Btau3.1_Chr10.28	[1]	(54,55)		complement(261146..261703)			Hereford		Btau3.1_ChrUn.298	[1]	(54)	15371..15928
		TRAV22-1*03	F							Hereford			Btau3.1_ChrUn.129	[1]	(54,55)		286419..286976
	TRAV22-2	TRAV22-2*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	374665..375222			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(204855..205412)
	TRAV22-3	TRAV22-3*01	ORF	(1)		10				Hereford	CM008177.2		IMGT000049			MAP	434798..435364
	TRAV22-4	TRAV22-4*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	659443..660003			Hereford		Btau3.1_ChrUn.139	[1]	(54)	327169..327729
	TRAV22-5	TRAV22-5*01	P	(24)		10				Hereford	CM008177.2		IMGT000049			MAP	675468..>675653	(57)
	TRAV22-5	TRAV22-5*02	P	(24)						Hereford			Btau3.1_ChrUn.139	[1]	(54,55)		346703..>346888	(57)
	TRAV22-6	TRAV22-6*01	P	(25)		10				Hereford	CM008177.2		IMGT000049			MAP	1834670..1835230			Hereford		Btau3.1_ChrUn.298	[1]	(54)	240521..241081
	TRAV22-7	TRAV22-7*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	1914486..1915042
		TRAV22-7*02	F							Hereford			Btau3.1_ChrUn.1227	[1]	(54,55)		complement(51323..51879)
		TRAV22-7*03	P	(2)						Hereford			Btau3.1_ChrUn.2188	[1]	(54,55)		22462..23017
	TRAV22-8	TRAV22-8*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	2188110..2188687			Hereford		Btau3.1_ChrUn.158	[1]	(54)	complement(221525..222102)
	TRAV22-9	TRAV22-9*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	2241729..2242289			Hereford		Btau3.1_ChrUn.158	[1]	(54)	complement(168620..169180)
	TRAV22-9	TRAV22-9*02	P	(2)						Hereford			Btau3.1_ChrUn.129	[1]	(54,55)		438033..438592
	TRAV22-10	TRAV22-10*01	ORF	(26)		10				Hereford	CM008177.2		IMGT000049			MAP	2267026..2267563
	TRAV22-11	TRAV22-11*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2336705..2337271)
	TRAV22-12	TRAV22-12*01	P	(27)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2457570..2458105)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	complement(171994..172529)
	TRAV22-13	TRAV22-13*01	P	(25)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2484486..2485028)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(17101..17643)
	TRAV22-14	TRAV22-14*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	complement(2642348..2642918)			Hereford		Btau3.1_ChrUn.129	[1]	(54)	377444..378015
	TRAV22-14	TRAV22-14*02	F							Hereford			Btau3.1_ChrUn.221	[1]	(54,55)		complement(202897..203467)
	TRAV22-15	TRAV22-15*01	ORF	(22)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2669926..2670504)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(230782..231360)
	TRAV22-15	TRAV22-15*01	ORF	(22)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2669926..2670504)			Hereford		Btau3.1_ChrUn.2578	[1]	(54)	complement(21752..22330)
	TRAV22-16	TRAV22-16*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2686535..2687095)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(247295..247855)
TRAV23	TRAV23-1	TRAV23-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	330174..330719
	TRAV23-1	TRAV23-1*02	F			10				Hereford			Btau3.1_Chr10.28	[1]	(54,55)		complement(252136..252681)
	TRAV23-2	TRAV23-2*01	P	(28)		10				Hereford	CM008177.2		IMGT000049			MAP	660641..661188			Hereford		Btau3.1_ChrUn.139	[1]	(54)	328375..328922
	TRAV23-3	TRAV23-3*01	P	(29)		10				Hereford	CM008177.2		IMGT000049			MAP	680342..680883			Hereford		Btau3.1_ChrUn.139	[1]	(54)	351571..352112
	TRAV23-4	TRAV23-4*01	P	(30)		10				Hereford	CM008177.2		IMGT000049			MAP	<720239..720415	(57)
	TRAV23-4	TRAV23-4*02	P	(30)						Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		<625400..625576	(57)
	TRAV23-5	TRAV23-5*01	P	(10)		10				Hereford	CM008177.2		IMGT000049			MAP	1835882..1836419
	TRAV23-6	TRAV23-6*01	P	(31)		10				Hereford	CM008177.2		IMGT000049			MAP	2167830..2168406
	TRAV23-6	TRAV23-6*02	P	(32)						Hereford			Btau3.1_ChrUn.158	[1]	(54,55)		complement(241805..242382)
	TRAV23-7	TRAV23-7*01	P	(4)		10				Hereford	CM008177.2		IMGT000049			MAP	2194711..2195251
	TRAV23-7	TRAV23-7*02	P	(2)						Hereford			Btau3.1_ChrUn.158	[1]	(54,55)		complement(214593..215135)
	TRAV23-8	TRAV23-8*01	P	(12)		10				Hereford	CM008177.2		IMGT000049			MAP	2242941..2243481			Hereford		Btau3.1_ChrUn.129	[1]	(54)	439244..439791
	TRAV23-8D	TRAV23-8D*01	ORF	(33)		10				Hereford	CM008177.2		IMGT000049			MAP	2268214..2268754
	TRAV23-8D	TRAV23-8D*02	P	(12)						Hereford			Btau3.1_ChrUn.158	[1]	(54,55)		complement(167428..167968)
	TRAV23-9	TRAV23-9*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2435713..2436255)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	244310..244852
	TRAV23-10	TRAV23-10*01	P	(34)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2456375..2456920)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	complement(170799..171344)
	TRAV23-11	TRAV23-11*01	ORF	(33)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2483295..2483835)
	TRAV23-11	TRAV23-11*02	P	(16)						Hereford			Btau3.1_ChrUn.221	[1]	(54,55)		complement(15912..16452)
	TRAV23-12	TRAV23-12*01	P	(31)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2664639..2665199)
	TRAV23-12	TRAV23-12*02	P	(31)						Hereford			Btau3.1_ChrUn.221	[1]	(54,55)		complement(225478..226039)			Hereford		Btau3.1_ChrUn.2578	[1]	(54)	complement(16464..17025)
TRAV24	TRAV24-1	TRAV24-1*01	P	(16)		10				Hereford	CM008177.2		IMGT000049			MAP	743401..743947			Hereford		Btau3.1_ChrUn.41	[1]	(54)	648491..649037
	TRAV24-1D	TRAV24-1D*01	P	(16)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2389705..2390251)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	299983..300529
	TRAV24-2	TRAV24-2*01	ORF	(18)		10				Hereford	CM008177.2		IMGT000049			MAP	1863764..1864310			Hereford		Btau3.1_ChrUn.298	[1]	(54)	273169..273715
	TRAV24-2	TRAV24-2*02	F							Hereford			Btau3.1_ChrUn.139	[1]	(54,55)		397805..398351
	TRAV24-3	TRAV24-3*01	P	(4)		10				Hereford	CM008177.2		IMGT000049			MAP	2182877..2184023
	TRAV24-4	TRAV24-4*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	2284963..2285510
	TRAV24-5	TRAV24-5*01	P	(4)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2647663..2648204)			Hereford		Btau3.1_ChrUn.129	[1]	(54)	372126..372668
	TRAV24-5	TRAV24-5*02	P	(4)						Hereford			Btau3.1_ChrUn.221	[1]	(54,55)		complement(208247..208788)
	TRAV24-6	TRAV24-6*01	P	(5)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2674571..2674847)	(57)		Hereford		Btau3.1_ChrUn.129	[1]	(54)	337265..337541	(57)
		TRAV24-6*01	P	(5)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2674571..2674847)	(57)		Hereford		Btau3.1_ChrUn.2578	[1]	(54)	866..1142	(57)
		TRAV24-6*02	P	(35)						Hereford			Btau3.1_ChrUn.221	[1]	(54,55)		complement(235447..>235690)	(57)		Hereford		Btau3.1_ChrUn.2578	[1]	(54)	complement(26403..>26646)	(57)
TRAV25	TRAV25-1	TRAV25-1*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	357902..358535			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(221848..222481)
	TRAV25-2	TRAV25-2*01	P	(16)		10				Hereford	CM008177.2		IMGT000049			MAP	640808..641438
	TRAV25-3	TRAV25-3*01	P	(36)		10				Hereford	CM008177.2		IMGT000049			MAP	749703..750333			Hereford		Btau3.1_ChrUn.41	[1]	(54)	654796..655426
	TRAV25-3D	TRAV25-3D*01	P	(36)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2383317..2383947)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	306294..306924
	TRAV25-4	TRAV25-4*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	1811128..1811760			Hereford		Btau3.1_ChrUn.139	[1]	(54)	297173..297802
	TRAV25-5	TRAV25-5*01	P	(32)		10				Hereford	CM008177.2		IMGT000049			MAP	1874620..1875249			Hereford		Btau3.1_ChrUn.298	[1]	(54)	286797..287426
	TRAV25-6	TRAV25-6*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	1936569..1937198
	TRAV25-7	TRAV25-7*01	P	(37)		10				Hereford	CM008177.2		IMGT000049			MAP	1944748..1945348
	TRAV25-8	TRAV25-8*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	1953029..1953660
	TRAV25-8	TRAV25-8*02	F							Hereford			Btau3.1_ChrUn.1227	[1]	(54,55)		complement(29157..29788)
	TRAV25-9	TRAV25-9*01	P	(38)		10				Hereford	CM008177.2		IMGT000049			MAP	2224504..2225125			Hereford		Btau3.1_ChrUn.158	[1]	(54)	complement(185784..186405)
	TRAV25-10	TRAV25-10*01	P	(39)		10				Hereford	CM008177.2		IMGT000049			MAP	2244899..2245526
	TRAV25-11	TRAV25-11*01	P	(36)		10				Hereford	CM008177.2		IMGT000049			MAP	2293399..2294029
	TRAV25-12	TRAV25-12*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2479983..2480616)
	TRAV25-12	TRAV25-12*02	P	(4)						Hereford			Btau3.1_ChrUn.221	[1]	(54,55)		complement(12682..13314)
	TRAV25-13	TRAV25-13*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2503895..2504513)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(36589..37203)
	TRAV25-13	TRAV25-13*02	F							Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		513515..514137
	TRAV25-14	TRAV25-14*01	ORF	(40)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2696582..2697215)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(257349..257982)
																						Btau3.1_ChrUn.3458	[1]	(54)	complement(9041..9674)
																						Btau3.1_ChrUn.41	[1]	(54)	486772..487405
TRAV26	TRAV26	TRAV26*01	P	(41)		10				Hereford	CM008177.2		IMGT000049			MAP	2024329..2024602	(57)
		TRAV26*02	P	(42)						Hereford			Btau3.1_ChrUn.158	[1]	(54,55)		complement(369026..369302)	(57)
		TRAV26*03	P	(41)						Hereford			Btau3.1_ChrUn.1907	[1]	(54,55)		7451..7727	(57)
TRAV27	TRAV27	TRAV27*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	1978338..1978926
TRAV27	TRAV27	TRAV27*02	ORF	(20)						Hereford			Btau3.1_ChrUn.158	[1]	(54,55)		complement(408318..408905)
TRAV28	TRAV28-1	TRAV28-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	1988246..1988845
	TRAV28-1	TRAV28-1*02	F							Hereford			Btau3.1_ChrUn.158	[1]	(54,55)		complement(398413..399012)
	TRAV28-2	TRAV28-2*01	P	(30)		10				Hereford	CM008177.2		IMGT000049			MAP	<2041403..>2041526	(57)		Hereford		Btau3.1_ChrUn.1948	[1]	(54)	<867..>990	(57)
	TRAV28-3	TRAV28-3*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	2042013..2042605			Hereford		Btau3.1_ChrUn.158	[1]	(54)	complement(354775..355367)
	TRAV28-3	TRAV28-3*02	F							Hereford			Btau3.1_ChrUn.1907	[1]	(54,55)		34147..34739			Hereford		Btau3.1_ChrUn.1948	[1]	(54)	1479..2071
TRAV29	TRAV29-1	TRAV29-1*01	ORF	(20)		10				Hereford	CM008177.2		IMGT000049			MAP	1996493..1997064			Hereford		Btau3.1_ChrUn.158	[1]	(54)	complement(388708..389279)
	TRAV29-2	TRAV29-2*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	2048229..2048794
		TRAV29-2*02	F				+	+		Hereford			Btau3.1_ChrUn.158	[1]	(54,55)		complement(348772..349343)			Hereford		Btau3.1_ChrUn.1948	[1]	(54)	7795..8366
		TRAV29-2*03	F				+	+		Hereford			Btau3.1_ChrUn.1907	[1]	(54,55)		40477..41048
TRAV33	TRAV33-1	TRAV33-1*01	P	(43)		10				Hereford	CM008177.2		IMGT000049			MAP	2004781..2005371			Hereford		Btau3.1_ChrUn.158	[1]	(54)	complement(380387..380977)
	TRAV33-2	TRAV33-2*01	P	(4)		10				Hereford	CM008177.2		IMGT000049			MAP	2037406..2038891
	TRAV33-2	TRAV33-2*02	P	(4)						Hereford			Btau3.1_ChrUn.158	[1]	(54,55)		complement(358493..359981)
	TRAV33-3	TRAV33-3*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	2051734..2052289
		TRAV33-3*02	F							Hereford	TRDV2S1*01		Btau3.1_ChrUn.158	[1]	(54,55)		complement(345101..345657)
		TRAV33-3*03	F							Hereford	TRDV2S2*01		Btau3.1_ChrUn.1907	[1]	(54,55)		43992..44548
		TRAV33-3*04	F				+	+		Hereford	TRDV2S3*01		Btau3.1_ChrUn.1948	[1]	(54,55)		11302..11858
TRAV34	TRAV34-1	TRAV34-1*01	P	(44)		10				Hereford	CM008177.2		IMGT000049			MAP	2028117..2028388	(57)		Hereford		Btau3.1_ChrUn.1907	[1]	(54)	10523..10794	(57)
	TRAV34-1	TRAV34-1*02	P	(44)						Hereford			Btau3.1_ChrUn.158	[1]	(54,55)		complement(365986..366257)	(57)
	TRAV34-2	TRAV34-2*01	P	(45)		10				Hereford	CM008177.2		IMGT000049			MAP	2071349..2072010
	TRAV34-2	TRAV34-2*02	P	(45)						Hereford			Btau3.1_ChrUn.1948	[1]	(54,55)		22935..23599
TRAV35	TRAV35-1	TRAV35-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	2084690..2085319			Hereford		Btau3.1_ChrUn.158	[1]	(54)	complement(330499..331128)
TRAV35	TRAV35-2	TRAV35-2*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	2875852..2876481
TRAV36	TRAV36-1	TRAV36-1*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	2092533..2093116			Hereford		Btau3.1_ChrUn.158	[1]	(54)	complement(324490..325074)
	TRAV36-1	TRAV36-1*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	2092533..2093116			Hereford		Btau3.1_ChrUn.1002	[1]	(54)	91089..91672
	TRAV36-2	TRAV36-2*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	2883700..2884293			Hereford		Btau3.1_ChrUn.1907	[1]	(54)	complement(17341..17934)
TRAV37	TRAV37-1	TRAV37-1*01	P	(10)		10				Hereford	CM008177.2		IMGT000049			MAP	2128803..2129354			Hereford		Btau3.1_ChrUn.158	[1]	(2,54)	complement(290412..290964)
TRAV37	TRAV37-2	TRAV37-2*01	P	(46)		10				Hereford	CM008177.2		IMGT000049			MAP	2917922..2918471
TRAV38	TRAV38-1	TRAV38-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	2133717..2134338
	TRAV38-1	TRAV38-1*02	F							Hereford			Btau3.1_ChrUn.158	[1]	(54,55)		complement(285112..285733)
	TRAV38-2	TRAV38-2*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	2136576..2137216			Hereford		Btau3.1_ChrUn.158	[1]	(54)	complement(282232..282872)
	TRAV38-2	TRAV38-2*02	F							Hereford			Btau3.1_ChrUn.1002	[1]	(54,55)		5482..6125
	TRAV38-3	TRAV38-3*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	2144647..2145287			Hereford		Btau3.1_ChrUn.158	[1]	(54)	complement(274162..274802)
	TRAV38-3	TRAV38-3*02	F							Hereford			Btau3.1_ChrUn.1907	[1]	(54,55)		48664..49304
	TRAV38-4	TRAV38-4*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	2923155..2923776
	TRAV38-5	TRAV38-5*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	2930252..2930889
	TRAV38-6	TRAV38-6*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	2938242..2938882
TRAV39	TRAV39-1	TRAV39-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	2157306..2157838			Hereford		Btau3.1_ChrUn.158	[1]	(54)	complement(252376..252908)
TRAV39	TRAV39-2	TRAV39-2*01	ORF	(47)		10				Hereford	CM008177.2		IMGT000049			MAP	2950563..2951098			Hereford		Btau3.1_ChrUn.1002	[1]	(54)	23696..24231
TRAV40	TRAV40	TRAV40*01	P	(30)		10				Hereford	CM008177.2		IMGT000049			MAP	<2965379..2965524	(57)		Hereford		Btau3.1_ChrUn.1002	[1]	(54)	<42153..42298	(57)
TRAV41	TRAV41	TRAV41*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	2969049..2969624			Hereford		Btau3.1_ChrUn.1002	[1]	(54)	45823..46398
TRAV43	TRAV43-1	TRAV43-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2315646..2316214)
	TRAV43-2	TRAV43-2*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2609927..2610495)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(149328..149896)
	TRAV43-3	TRAV43-3*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2803669..2804226)
		TRAV43-3*02	F							Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		complement(95514..96071)
		TRAV43-3*03	F							Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		376758..377315
		TRAV43-3*04	F				+	+		Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		complement(587310..587867)
TRAV44	TRAV44-1	TRAV44-1*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	371402..372210			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(207873..208682)
																						Btau3.1_ChrUn.129	[1]	(54)	322620..323429
																						Btau3.1_ChrUn.3458	[1]	(54)	complement(2005..2813)
	TRAV44-2	TRAV44-2*01	P	(16)		10				Hereford	CM008177.2		IMGT000049			MAP	412446..413259
	TRAV44-3	TRAV44-3*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	656191..657003			Hereford		Btau3.1_ChrUn.139	[1]	(54)	323917..324729
	TRAV44-4	TRAV44-4*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	709906..711047			Hereford		Btau3.1_ChrUn.41	[1]	(54)	614847..615988
	TRAV44-5	TRAV44-5*01	P	(48)		10				Hereford	CM008177.2		IMGT000049			MAP	731532..732669			Hereford		Btau3.1_ChrUn.41	[1]	(54)	636620..637757
	TRAV44-5	TRAV44-5*02	P	(48)		10				Hereford			Btau3.1_Chr10.28	[1]	(54,55)		91464..92601
	TRAV44-6	TRAV44-6*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	1831409..1832219			Hereford		Btau3.1_ChrUn.298	[1]	(54)	237257..238067
	TRAV44-7	TRAV44-7*01	P	(4)		10				Hereford	CM008177.2		IMGT000049			MAP	1845259..1846393
	TRAV44-8	TRAV44-8*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	1892643..1893741			Hereford		Btau3.1_ChrUn.1227	[1]	(54)	complement(72686..73784)
	TRAV44-9	TRAV44-9*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	1960308..1961260			Hereford		Btau3.1_ChrUn.1227	[1]	(54)	complement(21557..22509)
	TRAV44-10	TRAV44-10*01	F			10	+	+		Hereford	CM008177.2		IMGT000049			MAP	2210173..2211319			Hereford		Btau3.1_ChrUn.158	[1]	(54)	complement(198121..199266)
	TRAV44-11	TRAV44-11*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	2260267..2261083
	TRAV44-12	TRAV44-12*01	P	(49)		10				Hereford	CM008177.2		IMGT000049			MAP	2273805..2274923			Hereford		Btau3.1_ChrUn.158	[1]	(54)	complement(161259..162377)
	TRAV44-13	TRAV44-13*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2358089..2358895)
	TRAV44-14	TRAV44-14*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2399833..2400969)
	TRAV44-14	TRAV44-14*02	P	(2)						Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		289261..290397
	TRAV44-15	TRAV44-15*01	ORF	(50)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2417776..2418912)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	261738..262874
	TRAV44-16	TRAV44-16*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2464061..2464873)
	TRAV44-16	TRAV44-16*02	P	(2)						Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		complement(178485..179301)
	TRAV44-17	TRAV44-17*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2487946..2488753)
	TRAV44-17	TRAV44-17*02	P	(2)						Hereford			Btau3.1_ChrUn.221	[1]	(54,55)		complement(20567..21372)
	TRAV44-18	TRAV44-18*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2689552..2690360)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(250313..251121)
TRAV45	TRAV45-1	TRAV45-1*01	P	(51)		10				Hereford	CM008177.2		IMGT000049			MAP	241607..242114			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(302653..303160)
	TRAV45-2	TRAV45-2*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	250102..250606			Hereford		Btau3.1_Chr10.28	[1]	(54)	complement(294161..294665)
	TRAV45-2	TRAV45-2*02	F				+	+		Hereford			Btau3.1_ChrUn.129	[1]	(54,55)		254157..254916
	TRAV45-3	TRAV45-3*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	546892..547401			Hereford		Btau3.1_ChrUn.129	[1]	(54)	220316..220825
	TRAV45-4	TRAV45-4*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	552581..553090			Hereford		Btau3.1_ChrUn.129	[1]	(54)	226005..226514
	TRAV45-5	TRAV45-5*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	558423..558934			Hereford		Btau3.1_ChrUn.129	[1]	(54)	237233..237744
	TRAV45-5	TRAV45-5*02	(F)							Hereford			AY227782	[2]	(55)	#g	3874..4157	(57)
	TRAV45-6	TRAV45-6*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	592891..593402
	TRAV45-6	TRAV45-6*02	F							Hereford			Btau3.1_ChrUn.221	[1]	(54,55)		complement(309577..310088)
	TRAV45-7	TRAV45-7*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	598601..599110
	TRAV45-8	TRAV45-8*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	605339..605850
	TRAV45-9	TRAV45-9*01	P	(52)		10				Hereford	CM008177.2		IMGT000049			MAP	629371..630120
	TRAV45-9	TRAV45-9*02	P	(52)						Hereford			Btau3.1_ChrUn.139	[1]	(54,55)		286077..286826
	TRAV45-10	TRAV45-10*01	ORF	(20)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2529999..2530503)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(68819..69323)
	TRAV45-11	TRAV45-11*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2536929..2537440)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(76417..76928)
	TRAV45-12	TRAV45-12*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2548788..2549300)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(88281..88793)
	TRAV45-13	TRAV45-13*01	P	(14)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2729021..2729529)			Hereford		Btau3.1_ChrUn.221	[1]	(54)	complement(289814..290322)
	TRAV45-13	TRAV45-13*02	F							Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		451448..451959
	TRAV45-14	TRAV45-14*01	P	(2)		10				Hereford	CM008177.2		IMGT000049			MAP	complement(2740605..2741117)
	TRAV45-14	TRAV45-14*02	F							Hereford			Btau3.1_ChrUn.221	[1]	(54,55)		complement(301399..301910)			Hereford		Btau3.1_ChrUn.41	[1]	(54)	439860..440371
	TRAV45-15	TRAV45-15*01	F			10				Hereford	CM008177.2		IMGT000049			MAP	complement(2746329..2746840)
	TRAV45-15	TRAV45-15*02	F							Hereford			Btau3.1_ChrUn.41	[1]	(54,55)		433849..434360
TRAV46	TRAV46	TRAV46*01	P	(53)		10				Hereford	CM008177.2		IMGT000049			MAP	3072223..3072489	(57)		Hereford		Btau3.1_ChrUn.158	[1]	(54)	complement(56147..56413)	(57)

MAP: Mapped reference sequences.
#g: rearranged genomic DNA

IMGT notes:

(1) noncanonical V-HEPTAMER
(2) frameshift in V-REGION
(3) frameshift in L-PART2, frameshift in V-REGION
(4) frameshifts in V-REGION
(5) no L-PART1, STOP-CODON in V-REGION
(6) several STOP-CODON in V-REGION, frameshifts in V-REGION
(7) no ACCEPTOR-SPLICE, frameshifts in V-REGION
(8) no INIT-CODON, no ACCEPTOR-SPLICE, frameshifts in V-REGION
(9) STOP-CODON in V-REGION, frameshift in V-REGION
(10) frameshift in L-PART1, frameshift in V-REGION
(11) deletions in V-REGION, no V-RS
(12) no INIT-CODON
(13) no 1st-CYS
(14) frameshift in L-PART1
(15) STOP-CODON in L-PART1, insertion of 645 nt in V-REGION
(16) STOP-CODON in V-REGION
(17) unexpected V-INTRON length
(18) noncanonical DONOR-SPLICE
(19) frameshift in L-PART2
(20) noncanonical V-NONAMER
(21) frameshift in L-PART1, frameshifts in V-REGION, no V-RS
(22) noncanonical ACCEPTOR-SPLICE
(23) frameshift in L-PART1, frameshift in L-PART2, frameshifts in V-REGION
(24) no INIT-CODON, frameshift in L-PART1, deletions in V-REGION, no V-RS
(25) STOP-CODON in L-PART2
(26) deletions in V-REGION, no 1st-CYS
(27) STOP-CODON in L-PART2, frameshifts in V-REGION
(28) no INIT-CODON, STOP-CODON in L-PART1, STOP-CODON in V-REGION
(29) STOP-CODON in L-PART1, the splicing between the DONOR-SPLICE of L-PART1 and the ACCEPTOR-SPLICE of L-PART2 results into a STOP-CODON, STOP-CODON in V-REGION
(30) truncated pseudogene
(31) STOP-CODON in V-REGION, frameshifts in V-REGION
(32) several STOP-CODON in V-REGION, frameshift in V-REGION
(33) unexpected V-SPACER length
(34) frameshift in L-PART1, STOP-CODON in L-PART2, no CONSERVED-TRP, frameshift in V-REGION
(35) no L-PART1, no L-PART2, deletions in V-REGION, several STOP-CODON in V-REGION
(36) STOP-CODON in L-PART1, STOP-CODON in V-REGION
(37) frameshifts in L-PART1, frameshift in L-PART2, frameshifts in V-REGION
(38) the splicing between the DONOR-SPLICE of L-PART1 and the ACCEPTOR-SPLICE of L-PART2 results into a STOP-CODON, frameshift in L-PART2, STOP-CODON in V-REGION
(39) frameshift in L-PART2, STOP-CODON in V-REGION
(40) no 2nd-CYS
(41) no INIT-CODON, STOP-CODON in V-REGION, no V-NONAMER
(42) no INIT-CODON, several STOP-CODON in V-REGION, no V-NONAMER
(43) no INIT-CODON, frameshifts in V-REGION
(44) frameshift in L-PART2, frameshifts in V-REGION, no V-NONAMER
(45) frameshift in L-PART2, frameshifts in V-REGION
(46) STOP-CODON in L-PART1, frameshift in V-REGION
(47) no 1st-CYS, noncanonical V-HEPTAMER
(48) no INIT-CODON, STOP-CODON in V-REGION
(49) several STOP-CODON in V-REGION
(50) noncanonical V-HEPTAMER, noncanonical V-NONAMER
(51) frameshift in L-PART1, STOP-CODON in V-REGION
(52) no L-PART2
(53) no INIT-CODON, STOP-CODON in V-REGION, frameshifts in V-REGION, no V-NONAMER
(54) The localization of the sequences in the Btau3.1 project is indicated in the accession number after the underscore
(55) Sequence not in locus reference sequence (assembly ARS-UCD1.2)
(56) Functionality different from the reference sequence: F
(57) Positions of V-REGION

IMGT references:

[1] Herzig C.T. et al., BMC Genomics, 11, 100 (2010). PMID:20144200
[2] Conrad M.L. et al., Unpublished.
[3] Reinink P. and Van Rhijn I., Immunogenetics, 61, 541-549 (2009). PMID:19568741
[4] Connelley et al., BMC Genomics, 15, 994 (2014). PMID:25408163

More information:

See also (IMGT Scientific chart):

Created:: 18/03/2020
Last updated:: 22/09/2023
Authors:: Perrine Pégorier

IMGT Repertoire (IG and TR)

Gene table: bovine (Bos taurus) TRAV