IMGT Repertoire (IG and TR)
Locus in genome assembly: Bornean orangutan (Pongo pygmaeus) TRB locus
Bornean orangutan (Pongo pygmaeus) TRB locus
| IMGT locus | TRB locus | TRB locus |
|---|---|---|
| IMGT locus ID: Ponpyg_TRB_1 | IMGT locus ID: Ponpyg_TRB_2 | |
| Taxonomy | Pongo pygmaeus (Bornean orangutan), taxon:9600, isolate: AG05252 | Pongo pygmaeus (Bornean orangutan), taxon:9600, isolate: AG05252 |
| Genome assembly | NHGRI_mPonPyg2-v2.1_pri | NHGRI_mPonPyg2-v2.0_alt |
| GenBank assembly ID | GCA_028885625.3 | GCA_028885525.2 |
| RefSeq assembly ID | GCF_028885625.2 | |
| BAC library | ||
| Chromosome | 6 | 6 |
| Chromosome sequence ID and locus positions (GenBank assembly) | CM054636.2 (141310307..142031442) | CM054613.2 (142029032..142753255) |
| Chromosome sequence ID and locus positions (RefSeq assembly) | NC_072379.2 (141310307..142031442) | |
| IMGT locus orientation on the chromosome | FWD | FWD |
| IMGT/LIGM-DB locus reference sequence (ID) | IMGT000284 | IMGT000285 |
| IMGT/LIGM-DB locus reference sequence length (bp) | 721136 | 724224 |
More information:
- Gene table: Bornean orangutan (Pongo pygmaeus) TRBV
- Gene table: Bornean orangutan (Pongo pygmaeus) TRBD
- Gene table: Bornean orangutan (Pongo pygmaeus) TRBJ
- Gene table: Bornean orangutan (Pongo pygmaeus) TRBC
- Potential germline repertoire: Bornean orangutan (Pongo pygmaeus) TRBV genes on chromosome 6
- Created:
- 25/10/2025
- Last updated:
- 25/10/2025
- Authors:
- Shamsa Batool
