preabsDiv {IMGTStatClonotype}R Documentation

Gene presence/absence in the IMGT clonotypes (AA) for clonotype diversity

Description

This function allows the creation of a new boolean matrix indicating the presence (coded by 1) or the absence (coded by 0) of genes in the IMGT clonotypes (AA) for clonotype diversity.

Usage

preabsDiv(datag, data)

Arguments

datag

IMGT/HighV-QUEST output without CDR3-IMGT outlier lengths issued from the function clonRem

data

issued from the function meltgene

Value

Boolean matrix with IMGT clonotypes (AA) in rows and gene names in columns.

Examples


b1<-preabsDiv(MID1,set1)
b2<-preabsDiv(MID2,set2)


[Package IMGTStatClonotype version 1.0.3 Index]