Citing IMGT/GENE-DB: Giudicelli V., Chaume D. and Lefranc M.-P.. Nucleic Acids Res., 33: D256 - D261 (2005). PMID: 15608191

IMGT/GENE-DB program version: 3.1.38 (08 November 2022)
IMGT/GENE-DB data updates

IMGT/GENE-DB DETAILED RESULTS

Selected genes: Homo sapiens IGKJ3

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IMGT gene name and definition

IMGT gene name:	Homo sapiens IGKJ3
IMGT gene definition:	Homo sapiens immunoglobulin kappa joining 3

Chromosomal localization

Locus name:	Homo sapiens IGK locus
Chromosome:	2
Chromosomal localization:	2p11.2

Localizations in genome assemblies

Assembly	Assembly Unit	Designation	NCBI Accession number	IMGT allele name	Fct	IMGT label	Positions in NCBI Accession number	Orientation
GRCh38.p14	Primary Assembly	Full chromosome 2	NC_000002.12	IGKJ3*01	F	J-GENE-UNIT	88861221..88861296	REV
						J-REGION	88861221..88861258	REV

Number of alleles: 1

IMGT reference alleles

IMGT allele names for IGKJ3	IMGT gene functionality	R	T	Pr	Isolate	Clone name	Accession numbers	Molecule type
IGKJ3*01	F	+	+		-	J3	J00242	gDNA

		IMGT/GENE-DB reference sequences (in FASTA format)
IMGT allele names for IGKJ3	IMGT gene functionality	J-REGION
		F+ORF+all P	F+ORF+in-frame P
IGKJ3*01	F	nucleotides	amino acids

Other sequences from the literature (compiled in IMGT Gene tables, IMGT Repertoire)

IMGT allele names for IGKJ3	R	T	Pr	Isolate	Clone name	Accession numbers	Molecule type
IGKJ3*01	+	+		-		X61584	gDNA
IGKJ3*01	+	+		-		X63370	gDNA
IGKJ3*01	+	+		-		X67858	gDNA

IMGT Repertoire links

Locus and genes	Proteins and alleles	Genes and clinical entities
Chromosomal localization Gene table Locus representation	Table of alleles Protein Displays Alignment of alleles	Translocations and inversions Translocations and inversions

Annotated IMGT/LIGM-DB cDNA sequences for Homo sapiens IGKJ3: 364

Table of annotated IMGT/LIGM-DB cDNA sequences (Accession number, IMGT allele name, Sequence length, Sequence functionality, Sequence definition, Specificity)

Annotated IMGT/LIGM-DB rearranged genomic DNA sequences for Homo sapiens IGKJ3: 50

Table of annotated IMGT/LIGM-DB rearranged genomic DNA sequences (Accession number, IMGT allele name, Sequence length, Sequence functionality, Sequence definition, Specificity)

Annotated IMGT/3Dstructure-DB structures and IMGT/2Dstructure-DB amino acid sequences for Homo sapiens IGKJ3: 278

Table of annotated IMGT/3Dstructure-DB structures and IMGT/2Dstructure-DB amino acid sequences (IMGT entry ID, IMGT entry type, IMGT allele name, IMGT protein name, IMGT receptor type, IMGT receptor description, Species, Chain ID)

External links

Nomenclature
HGNC database: 5721

Genome databases
NCBI Gene: 28948
Ensembl: ENSG00000211595
GeneCards: IGKJ3
GenAtlas: 27546

Sequence databases
EMBL: J00242 X61584 X63370 X67858
DDBJ: J00242 X61584 X63370 X67858
GenBank: J00242 X61584 X63370 X67858

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Created: 2001-06-15
Last Modified: 2008-05-28