Views |
Sections |
| Accession number | X61584 |
|---|---|
| Sequence version | 1 |
| Secondary accession numbers | |
| IMGT annotation level | by annotators |
| Definition | H.sapiens gene for immunoglobulin joining region (kappa light chain) |
| Species | Homo sapiens (human) |
| Taxonomy | cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens |
| Sequence length | 1816 |
| IMGT/LIGM-DB dates | 21-MAY-1996 |
| 30-MAY-2017 (v. 10) |
| Specificities | |
|---|---|
| Disease related |
| Molecule type | gDNA |
|---|---|
| Configuration type | germline |
| Gene type | joining |
| Molecule entity type | J-gene |
| Functionality type | functional |
| Chain type | IG-Light, IG-Light-Kappa-IGK |
| Structure type | regular |
| Location type | |
| Other keywords | antigen receptor, Immunoglobulin superfamily (IgSF), immunoglobulin (IG) |
| IMGT Groups | |
|---|---|
| IMGT Subgroups |
| J-CLUSTER | 1..1816 | |
|---|---|---|
| db_xref | taxon:9606 | |
| dev_stage | adult | |
| mol_type | genomic DNA | |
| organism | Homo sapiens | |
| sex | Female | |
| tissue_type | placenta | |
| J-GENE | 1..431 | |
| IMGT_allele | IGKJ1*01 | |
| IMGT_gene | IGKJ1 | |
| 5'UTR | 1..250 | |
| J-NONAMER | 212..220 | |
| J-SPACER | 221..243 | |
| J-HEPTAMER | 244..250 | |
| J-REGION | 251..288 | |
| IMGT_allele | IGKJ1*01 | |
| IMGT_gene | IGKJ1 | |
|
gtggacgttcggccaagggaccaaggtggaaatcaaac
V D V R P R D Q G G N Q W T F G Q G T K V E I K G R S A K G P R W K S N |
||
| J-PHE | 258..260 | |
| DONOR-SPLICE | 288..290 | |
| 3'UTR | 289..431 | |
| J-GENE | 432..763 | |
| IMGT_allele | IGKJ2*01 | |
| IMGT_gene | IGKJ2 | |
| 5'UTR | 432..610 | |
| J-NONAMER | 572..580 | |
| J-SPACER | 581..603 | |
| J-HEPTAMER | 604..610 | |
| J-REGION | 611..649 | |
| IMGT_allele | IGKJ2*01 | |
| IMGT_gene | IGKJ2 | |
|
tgtacacttttggccaggggaccaagctggagatcaaac
C T L L A R G P S W R S N V H F W P G D Q A G D Q Y T F G Q G T K L E I K |
||
| J-PHE | 619..621 | |
| DONOR-SPLICE | 649..651 | |
| 3'UTR | 650..763 | |
| J-GENE | 764..1120 | |
| IMGT_allele | IGKJ3*01 | |
| IMGT_gene | IGKJ3 | |
| 5'UTR | 764..914 | |
| J-NONAMER | 876..884 | |
| J-SPACER | 885..907 | |
| J-HEPTAMER | 908..914 | |
| J-REGION | 915..952 | |
| IMGT_allele | IGKJ3*01 | |
| IMGT_gene | IGKJ3 | |
|
attcactttcggccctgggaccaaagtggatatcaaac
I H F R P W D Q S G Y Q F T F G P G T K V D I K S L S A L G P K W I S N |
||
| J-PHE | 922..924 | |
| DONOR-SPLICE | 952..954 | |
| 3'UTR | 953..1120 | |
| J-GENE | 1121..1446 | |
| IMGT_allele | IGKJ4*01 | |
| IMGT_gene | IGKJ4 | |
| 5'UTR | 1121..1248 | |
| J-NONAMER | 1210..1218 | |
| J-SPACER | 1219..1241 | |
| J-HEPTAMER | 1242..1248 | |
| J-REGION | 1249..1286 | |
| IMGT_allele | IGKJ4*01 | |
| IMGT_gene | IGKJ4 | |
|
gctcactttcggcggagggaccaaggtggagatcaaac
A H F R R R D Q G G D Q L T F G G G T K V E I K S L S A E G P R W R S N |
||
| J-PHE | 1256..1258 | |
| DONOR-SPLICE | 1286..1288 | |
| 3'UTR | 1287..1446 | |
| J-GENE | 1447..1816 | |
| IMGT_allele | IGKJ5*01 | |
| IMGT_gene | IGKJ5 | |
| 5'UTR | 1446..1566 | |
| J-NONAMER | 1528..1536 | |
| J-SPACER | 1537..1559 | |
| J-HEPTAMER | 1560..1566 | |
| J-REGION | 1567..1604 | |
| IMGT_allele | IGKJ5*01 | |
| IMGT_gene | IGKJ5 | |
|
gatcaccttcggccaagggacacgactggagattaaac
D H L R P R D T T G D * I T F G Q G T R L E I K S P S A K G H D W R L N |
||
| J-PHE | 1574..1576 | |
| DONOR-SPLICE | 1604..1606 | |
| J-C-INTRON | 1605..1816 |
| Database | Identifiers | Relation |
|---|---|---|
| ENA | X61584 |
Length : 1816 BP
Composition : 557 A; 293 C; 438 G; 528 T; 0 other
ataaatcaat aagcagtcca gatgtggcaa gttgtaagaa ggaaccatca aggccataga 60
cgtaaatata ttctcttctt ggattttagg tctcacctaa agaaaataaa cacatgctat 120
gtcagagaag cctcagggtt tccacacctg ctcgaaaagg gagttgagct tcagcagctg 180
acccaggact ctgttcccct ttggtgagaa gggtttctgt tcagcaagac aatggagagc 240
tctcactgtg gtggacgttc ggccaaggga ccaaggtgga aatcaaacgt gagtagaatt 300
taaactttgc ttcctcagtt gtctgtgtct tctgttccct gtgtctatga agtgatctat 360
aaggtgactc tgcaatcagc ctctgatatc cttcagggaa aagataaaga taagtctgta 420
gtcaaactcg agaattgatt gcacattttc tttgaagagc aagcaagatt cagtcattgg 480
gtgagaataa cttgtctaag taatagcttc agaaatgtcc tggggaacat aacatgttct 540
ggacagagcc ttggtcaatt gtcagaaagg gagtttttgt ataggaggga agttaagagg 600
aaccattgtg tgtacacttt tggccagggg accaagctgg agatcaaacg taagtacttt 660
tttccactga ttcttcactg ttgctaatta gtttactttg tgttcctttg tgtggatttt 720
cattagtcgg atgccaggga tctaacaaac ttcattccca ggttaggtac agaggagggg 780
aaattgttcc acaggacgct agcttgtggc taatttttaa gatttctaaa tcaaaataac 840
ttcattgggg gaaagaggct tgctgagctt tcagggagtt tttgtaaagg gaaaagttaa 900
gacgaatcac tgtgattcac tttcggccct gggaccaaag tggatatcaa acgtaagtac 960
atctgtctca attatcgtga gattttagtg ccattgtatc atttgtgcaa gttttgtgat 1020
attttggttg aataaacctg gtgacccaga agtaaatagc aggacaccag aaaatgaact 1080
taaaaagctg agcaaataga cgaatcattg ggtttgagag gagaatagga ttcatggggg 1140
aaatggggaa gaaatagcta gattttcccc tgaacaagca gcctatctca tatgattggc 1200
ttcaagagag gtttttgttg aggggaaagg gtgagatccc tcactgtggc tcactttcgg 1260
cggagggacc aaggtggaga tcaaacgtaa gtgcactttc ctaatgcttt ttcttataag 1320
gttttaaatt tggagcgttt ttgtgtttga gatattagct caggtcaatt ccaaagagta 1380
ccagattctt tcaaaaagtc agatgagtaa gggatagaaa attagttcat cttaaggaac 1440
agccaagcgc tagccagtta agtgaggcat ctcaattgca agattttctc tgcatcggtc 1500
aggttagtga tattaacagc gaaaagagat ttttgttaag gggaaagtaa ttaagttaac 1560
actgtggatc accttcggcc aagggacacg actggagatt aaacgtaagt aatttttcac 1620
tattgtcttc tgaaatttgg gtctgatggc cagtattgac ttttagaggc ttaaatagga 1680
gtttggtaaa gattggtaaa tgagggcatt taagatttgc catgggttgc aaaagttaaa 1740
ctcagcttca aaaatggatt tggagaaaaa aagattaaat tgctctaaac tgaatgacac 1800
aaagtaaaaa aaaaaa 1816
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