Views |
Sections |
| Accession number | Z13000 |
|---|---|
| Sequence version | 1 |
| Secondary accession numbers | |
| IMGT annotation level | by annotators |
| Definition | O.aries rearranged T-cell receptor gamma |
| Species | Ovis aries (sheep) |
| Taxonomy | Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis; Ovis aries |
| Sequence length | 672 |
| IMGT/LIGM-DB dates | 07-MAY-1996 |
| 18-JAN-2013 (v. 5) |
| Specificities | |
|---|---|
| Disease related |
| Molecule type | cDNA |
|---|---|
| Configuration type | undefined, rearranged |
| Gene type | constant, variable, joining |
| Molecule entity type | |
| Functionality type | productive |
| Chain type | TR-Gamma-TRG, TR-Gamma-3-TRGC3 |
| Structure type | regular |
| Location type | |
| Other keywords | antigen receptor, Immunoglobulin superfamily (IgSF), T cell receptor (TR), IMGT reference sequence |
| IMGT Groups | TRGV |
|---|---|
| IMGT Subgroups | TRGV2 |
| 5'UTR | 1..63 | |
|---|---|---|
| L-V-J-C-REGION | 64..>672 | |
| breed | White Alpine | |
| cell_type | peripheral lymphocytes | |
| dev_stage | 61 day old fetus | |
| organism | Ovis aries | |
|
atgatgcgggtcccagcgctgcttctggttttcctggctcctgtcatgcaggtgtcttccaacatggaaggggagaagatgtcaattactaaggcagctgtgcctggggcatttgttgaaatcatttgtgatcttatcacccaaaccgccaaatatatccactggtacaagtaccaggagggcacagctccccgacgccttctttactacgacatctcctactcaaaggttgtgttggaatcaggaatcagtgaagggaagtaccaagtttataaagagaagagctatacttttgcaatctcaaacctgcaagaaagtgattctggaatgtactactgtgctgtctgggagtacagttcaggctggaagaagatatttggaaaagcaactgagctcatagtagcttcccctgatagagaccttgataaagacatgtctcccaagcccactatgtttcttccttcgattaccgaaatcaagcgtgataatagtggaagatatctttgtcttctggaggactttttccctcatgttattaaggtttattggagagaaaaaagaggcaacaaagttttgccatcccaggagggaaaaaccattaagactctt
M M R V P A L L L V F L A P V M Q V S S N M E G E K M S I T K A A V P G A F V E I I C D L I T Q T A K Y I H W Y K Y Q E G T A P R R L L Y Y D I S Y S K V V L E S G I S E G K Y Q V Y K E K S Y T F A I S N L Q E S D S G M Y Y C A V W E Y S S G W K K I F G K A T E L I V A S P D R D L D K D M S P K P T M F L P S I T E I K R D N S G R Y L C L L E D F F P H V I K V Y W R E K R G N K V L P S Q E G K T I K T L * C G S Q R C F W F S W L L S C R C L P T W K G R R C Q L L R Q L C L G H L L K S F V I L S P K P P N I S T G T S T R R A Q L P D A F F T T T S P T Q R L C W N Q E S V K G S T K F I K R R A I L L Q S Q T C K K V I L E C T T V L S G S T V Q A G R R Y L E K Q L S S * * L P L I E T L I K T C L P S P L C F F L R L P K S S V I I V E D I F V F W R T F S L M L L R F I G E K K E A T K F C H P R R E K P L R L D A G P S A A S G F P G S C H A G V F Q H G R G E D V N Y * G S C A W G I C * N H L * S Y H P N R Q I Y P L V Q V P G G H S S P T P S L L R H L L L K G C V G I R N Q * R E V P S L * R E E L Y F C N L K P A R K * F W N V L L C C L G V Q F R L E E D I W K S N * A H S S F P * * R P * * R H V S Q A H Y V S S F D Y R N Q A * * * W K I S L S S G G L F P S C Y * G L L E R K K R Q Q S F A I P G G K N H * D S |
||
| L-V-J-REGION | 64..474 | |
|
atgatgcgggtcccagcgctgcttctggttttcctggctcctgtcatgcaggtgtcttccaacatggaaggggagaagatgtcaattactaaggcagctgtgcctggggcatttgttgaaatcatttgtgatcttatcacccaaaccgccaaatatatccactggtacaagtaccaggagggcacagctccccgacgccttctttactacgacatctcctactcaaaggttgtgttggaatcaggaatcagtgaagggaagtaccaagtttataaagagaagagctatacttttgcaatctcaaacctgcaagaaagtgattctggaatgtactactgtgctgtctgggagtacagttcaggctggaagaagatatttggaaaagcaactgagctcatagtagcttcccct
M M R V P A L L L V F L A P V M Q V S S N M E G E K M S I T K A A V P G A F V E I I C D L I T Q T A K Y I H W Y K Y Q E G T A P R R L L Y Y D I S Y S K V V L E S G I S E G K Y Q V Y K E K S Y T F A I S N L Q E S D S G M Y Y C A V W E Y S S G W K K I F G K A T E L I V A S P * C G S Q R C F W F S W L L S C R C L P T W K G R R C Q L L R Q L C L G H L L K S F V I L S P K P P N I S T G T S T R R A Q L P D A F F T T T S P T Q R L C W N Q E S V K G S T K F I K R R A I L L Q S Q T C K K V I L E C T T V L S G S T V Q A G R R Y L E K Q L S S * * L P D A G P S A A S G F P G S C H A G V F Q H G R G E D V N Y * G S C A W G I C * N H L * S Y H P N R Q I Y P L V Q V P G G H S S P T P S L L R H L L L K G C V G I R N Q * R E V P S L * R E E L Y F C N L K P A R K * F W N V L L C C L G V Q F R L E E D I W K S N * A H S S F P |
||
| L-V-REGION | 64..414 | |
| putative_limit | 3' side | |
|
atgatgcgggtcccagcgctgcttctggttttcctggctcctgtcatgcaggtgtcttccaacatggaaggggagaagatgtcaattactaaggcagctgtgcctggggcatttgttgaaatcatttgtgatcttatcacccaaaccgccaaatatatccactggtacaagtaccaggagggcacagctccccgacgccttctttactacgacatctcctactcaaaggttgtgttggaatcaggaatcagtgaagggaagtaccaagtttataaagagaagagctatacttttgcaatctcaaacctgcaagaaagtgattctggaatgtactactgtgctgtctgggag
M M R V P A L L L V F L A P V M Q V S S N M E G E K M S I T K A A V P G A F V E I I C D L I T Q T A K Y I H W Y K Y Q E G T A P R R L L Y Y D I S Y S K V V L E S G I S E G K Y Q V Y K E K S Y T F A I S N L Q E S D S G M Y Y C A V W E * C G S Q R C F W F S W L L S C R C L P T W K G R R C Q L L R Q L C L G H L L K S F V I L S P K P P N I S T G T S T R R A Q L P D A F F T T T S P T Q R L C W N Q E S V K G S T K F I K R R A I L L Q S Q T C K K V I L E C T T V L S G D A G P S A A S G F P G S C H A G V F Q H G R G E D V N Y * G S C A W G I C * N H L * S Y H P N R Q I Y P L V Q V P G G H S S P T P S L L R H L L L K G C V G I R N Q * R E V P S L * R E E L Y F C N L K P A R K * F W N V L L C C L G |
||
| L-REGION | 64..117 | |
|
atgatgcgggtcccagcgctgcttctggttttcctggctcctgtcatgcaggtg
M M R V P A L L L V F L A P V M Q V * C G S Q R C F W F S W L L S C R D A G P S A A S G F P G S C H A G |
||
| INIT-CODON | 64..66 | |
| V-J-C-REGION | 118..>672 | |
|
tcttccaacatggaaggggagaagatgtcaattactaaggcagctgtgcctggggcatttgttgaaatcatttgtgatcttatcacccaaaccgccaaatatatccactggtacaagtaccaggagggcacagctccccgacgccttctttactacgacatctcctactcaaaggttgtgttggaatcaggaatcagtgaagggaagtaccaagtttataaagagaagagctatacttttgcaatctcaaacctgcaagaaagtgattctggaatgtactactgtgctgtctgggagtacagttcaggctggaagaagatatttggaaaagcaactgagctcatagtagcttcccctgatagagaccttgataaagacatgtctcccaagcccactatgtttcttccttcgattaccgaaatcaagcgtgataatagtggaagatatctttgtcttctggaggactttttccctcatgttattaaggtttattggagagaaaaaagaggcaacaaagttttgccatcccaggagggaaaaaccattaagactctt
S S N M E G E K M S I T K A A V P G A F V E I I C D L I T Q T A K Y I H W Y K Y Q E G T A P R R L L Y Y D I S Y S K V V L E S G I S E G K Y Q V Y K E K S Y T F A I S N L Q E S D S G M Y Y C A V W E Y S S G W K K I F G K A T E L I V A S P D R D L D K D M S P K P T M F L P S I T E I K R D N S G R Y L C L L E D F F P H V I K V Y W R E K R G N K V L P S Q E G K T I K T L L P T W K G R R C Q L L R Q L C L G H L L K S F V I L S P K P P N I S T G T S T R R A Q L P D A F F T T T S P T Q R L C W N Q E S V K G S T K F I K R R A I L L Q S Q T C K K V I L E C T T V L S G S T V Q A G R R Y L E K Q L S S * * L P L I E T L I K T C L P S P L C F F L R L P K S S V I I V E D I F V F W R T F S L M L L R F I G E K K E A T K F C H P R R E K P L R L F Q H G R G E D V N Y * G S C A W G I C * N H L * S Y H P N R Q I Y P L V Q V P G G H S S P T P S L L R H L L L K G C V G I R N Q * R E V P S L * R E E L Y F C N L K P A R K * F W N V L L C C L G V Q F R L E E D I W K S N * A H S S F P * * R P * * R H V S Q A H Y V S S F D Y R N Q A * * * W K I S L S S G G L F P S C Y * G L L E R K K R Q Q S F A I P G G K N H * D S |
||
| V-J-REGION | 118..474 | |
|
tcttccaacatggaaggggagaagatgtcaattactaaggcagctgtgcctggggcatttgttgaaatcatttgtgatcttatcacccaaaccgccaaatatatccactggtacaagtaccaggagggcacagctccccgacgccttctttactacgacatctcctactcaaaggttgtgttggaatcaggaatcagtgaagggaagtaccaagtttataaagagaagagctatacttttgcaatctcaaacctgcaagaaagtgattctggaatgtactactgtgctgtctgggagtacagttcaggctggaagaagatatttggaaaagcaactgagctcatagtagcttcccct
S S N M E G E K M S I T K A A V P G A F V E I I C D L I T Q T A K Y I H W Y K Y Q E G T A P R R L L Y Y D I S Y S K V V L E S G I S E G K Y Q V Y K E K S Y T F A I S N L Q E S D S G M Y Y C A V W E Y S S G W K K I F G K A T E L I V A S P L P T W K G R R C Q L L R Q L C L G H L L K S F V I L S P K P P N I S T G T S T R R A Q L P D A F F T T T S P T Q R L C W N Q E S V K G S T K F I K R R A I L L Q S Q T C K K V I L E C T T V L S G S T V Q A G R R Y L E K Q L S S * * L P F Q H G R G E D V N Y * G S C A W G I C * N H L * S Y H P N R Q I Y P L V Q V P G G H S S P T P S L L R H L L L K G C V G I R N Q * R E V P S L * R E E L Y F C N L K P A R K * F W N V L L C C L G V Q F R L E E D I W K S N * A H S S F P |
||
| V-REGION | 118..414 | |
| gene | TRGV2S2 | |
| putative_limit | 3' side | |
|
tcttccaacatggaaggggagaagatgtcaattactaaggcagctgtgcctggggcatttgttgaaatcatttgtgatcttatcacccaaaccgccaaatatatccactggtacaagtaccaggagggcacagctccccgacgccttctttactacgacatctcctactcaaaggttgtgttggaatcaggaatcagtgaagggaagtaccaagtttataaagagaagagctatacttttgcaatctcaaacctgcaagaaagtgattctggaatgtactactgtgctgtctgggag
S S N M E G E K M S I T K A A V P G A F V E I I C D L I T Q T A K Y I H W Y K Y Q E G T A P R R L L Y Y D I S Y S K V V L E S G I S E G K Y Q V Y K E K S Y T F A I S N L Q E S D S G M Y Y C A V W E L P T W K G R R C Q L L R Q L C L G H L L K S F V I L S P K P P N I S T G T S T R R A Q L P D A F F T T T S P T Q R L C W N Q E S V K G S T K F I K R R A I L L Q S Q T C K K V I L E C T T V L S G F Q H G R G E D V N Y * G S C A W G I C * N H L * S Y H P N R Q I Y P L V Q V P G G H S S P T P S L L R H L L L K G C V G I R N Q * R E V P S L * R E E L Y F C N L K P A R K * F W N V L L C C L G |
||
| FR1-IMGT | 118..201 | |
| AA_IMGT | 1 to 26, including AA 15A, 15B | |
|
tcttccaacatggaaggggagaagatgtcaattactaaggcagctgtgcctggggcatttgttgaaatcatttgtgatcttatc
S S N M E G E K M S I T K A A V P G A F V E I I C D L I L P T W K G R R C Q L L R Q L C L G H L L K S F V I L F Q H G R G E D V N Y * G S C A W G I C * N H L * S Y |
||
| 1st-CYS | 190..192 | |
| CDR1-IMGT | 202..219 | |
| AA_IMGT | AA 27 to 38, AA 30, 31, 32, 33, 34 and 35 are missing | |
|
acccaaaccgccaaatat
T Q T A K Y P K P P N P N R Q I |
||
| FR2-IMGT | 220..270 | |
| AA_IMGT | 39 to 55 | |
|
atccactggtacaagtaccaggagggcacagctccccgacgccttctttac
I H W Y K Y Q E G T A P R R L L Y S T G T S T R R A Q L P D A F F P L V Q V P G G H S S P T P S L |
||
| CONSERVED-TRP | 226..228 | |
| CDR2-IMGT | 271..294 | |
| AA_IMGT | AA 56 to 65, AA 60 and 61 are missing | |
|
tacgacatctcctactcaaaggtt
Y D I S Y S K V T T S P T Q R R H L L L K G |
||
| FR3-IMGT | 295..402 | |
| AA_IMGT | 66 to 104, AA81, 82, 83 missing | |
|
gtgttggaatcaggaatcagtgaagggaagtaccaagtttataaagagaagagctatacttttgcaatctcaaacctgcaagaaagtgattctggaatgtactactgt
V L E S G I S E G K Y Q V Y K E K S Y T F A I S N L Q E S D S G M Y Y C C W N Q E S V K G S T K F I K R R A I L L Q S Q T C K K V I L E C T T V G I R N Q * R E V P S L * R E E L Y F C N L K P A R K * F W N V L L |
||
| 2nd-CYS | 400..402 | |
| CDR3-IMGT | 403..438 | |
| AA_IMGT | AA 105 to 117, AA 111 is missing | |
|
gctgtctgggagtacagttcaggctggaagaagata
A V W E Y S S G W K K I L S G S T V Q A G R R C L G V Q F R L E E D |
||
| JUNCTION | 400..441 | |
|
tgtgctgtctgggagtacagttcaggctggaagaagatattt
C A V W E Y S S G W K K I F V L S G S T V Q A G R R Y C C L G V Q F R L E E D I |
||
| N-REGION | 415..417 | |
| J-REGION | 418..474 | |
| gene | TRGJ3 | |
|
agttcaggctggaagaagatatttggaaaagcaactgagctcatagtagcttcccct
S S G W K K I F G K A T E L I V A S P V Q A G R R Y L E K Q L S S * * L P F R L E E D I W K S N * A H S S F P |
||
| J-PHE | 439..441 | |
| C-REGION | 442..>672 | |
| IMGT_gene | TRGC3 | |
|
ggaaaagcaactgagctcatagtagcttcccctgatagagaccttgataaagacatgtctcccaagcccactatgtttcttccttcgattaccgaaatcaagcgtgataatagtggaagatatctttgtcttctggaggactttttccctcatgttattaaggtttattggagagaaaaaagaggcaacaaagttttgccatcccaggagggaaaaaccattaagactctt
G K A T E L I V A S P D R D L D K D M S P K P T M F L P S I T E I K R D N S G R Y L C L L E D F F P H V I K V Y W R E K R G N K V L P S Q E G K T I K T L E K Q L S S * * L P L I E T L I K T C L P S P L C F F L R L P K S S V I I V E D I F V F W R T F S L M L L R F I G E K K E A T K F C H P R R E K P L R L K S N * A H S S F P * * R P * * R H V S Q A H Y V S S F D Y R N Q A * * * W K I S L S S G G L F P S C Y * G L L E R K K R Q Q S F A I P G G K N H * D S |
| Database | Identifiers | Relation |
|---|---|---|
| ENA | Z13000 |
Length : 672 BP
Composition : 186 A; 147 C; 154 G; 185 T; 0 other
atttgctgac tgacctgcct gtcacttata ctgggaacct aggtctagct cactgtccca 60
ggcatgatgc gggtcccagc gctgcttctg gttttcctgg ctcctgtcat gcaggtgtct 120
tccaacatgg aaggggagaa gatgtcaatt actaaggcag ctgtgcctgg ggcatttgtt 180
gaaatcattt gtgatcttat cacccaaacc gccaaatata tccactggta caagtaccag 240
gagggcacag ctccccgacg ccttctttac tacgacatct cctactcaaa ggttgtgttg 300
gaatcaggaa tcagtgaagg gaagtaccaa gtttataaag agaagagcta tacttttgca 360
atctcaaacc tgcaagaaag tgattctgga atgtactact gtgctgtctg ggagtacagt 420
tcaggctgga agaagatatt tggaaaagca actgagctca tagtagcttc ccctgataga 480
gaccttgata aagacatgtc tcccaagccc actatgtttc ttccttcgat taccgaaatc 540
aagcgtgata atagtggaag atatctttgt cttctggagg actttttccc tcatgttatt 600
aaggtttatt ggagagaaaa aagaggcaac aaagttttgc catcccagga gggaaaaacc 660
attaagactc tt 672
© Copyright 1995-2023 IMGT®, the international ImMunoGeneTics information system® | Terms of use | About us | Contact us | Citing IMGT
