IMGT/GENE-DB Consultation

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IMGT®, the international ImMunoGeneTics information system®	http://www.imgt.org

Citing IMGT/GENE-DB: Giudicelli V., Chaume D. and Lefranc M.-P.. Nucleic Acids Res., 33: D256 - D261 (2005). PMID:15608191

IMGT/GENE-DB program version: 3.1.42 (25 September 2024)
IMGT/GENE-DB data updates

IMGT/GENE-DB reference sequences in FASTA format:

Nucleotide sequences for F+ORF+all P alleles

The FASTA header contains 15 fields separated by '|':

1. IMGT/LIGM-DB accession number(s)
2. IMGT gene and allele name
3. species
4. IMGT allele functionality
5. exon(s), region name(s), or extracted label(s)
6. start and end positions in the IMGT/LIGM-DB accession number(s)
7. number of nucleotides in the IMGT/LIGM-DB accession number(s)
8. codon start, or 'NR' (not relevant) for non coding labels
9. +n: number of nucleotides (nt) added in 5' compared to the corresponding label extracted from IMGT/LIGM-DB
10. +n or -n: number of nucleotides (nt) added or removed in 3' compared to the corresponding label extracted from IMGT/LIGM-DB
11. +n, -n, and/or nS: number of added, deleted, and/or substituted nucleotides to correct sequencing errors, or 'not corrected' if non corrected sequencing errors
12. number of amino acids (AA): this field indicates that the sequence is in amino acids
13. number of characters in the sequence: nt (or AA)+IMGT gaps=total
14. partial (if it is)
15. reverse complementary (if it is)

Number of results = 4

>U03115|TRBV10-3*01|Homo sapiens|F|V-REGION|14880..15166|287 nt|1| | | | |287+0=287| | |
gatgctggaatcacccagagcccaagacacaaggtcacagagacaggaacaccagtgact
ctgagatgtcaccagactgagaaccaccgctatatgtactggtatcgacaagacccgggg
catgggctgaggctgatccattactcatatggtgttaaagatactgacaaaggagaagtc
tcagatggctatagtgtctctagatcaaagacagaggatttcctcctcactctggagtcc
gctaccagctcccagacatctgtgtacttctgtgccatcagtgagtc
>U17047|TRBV10-3*02|Homo sapiens|F|V-REGION|81..367|287 nt|1| | | | |287+0=287| | |
gatgctggaatcacccagagcccaagacacaaggtcacagagacaggaacaccagtgact
ctgagatgtcatcagactgagaaccaccgctatatgtactggtatcgacaagacccgggg
catgggctgaggctgatccattactcatatggtgttaaagatactgacaaaggagaagtc
tcagatggctatagtgtctctagatcaaagacagaggatttcctcctcactctggagtcc
gctaccagctcccagacatctgtgtacttctgtgccatcagtgagtc
>L33101|TRBV10-3*03|Homo sapiens|[F]|V-REGION|1..273|273 nt|1| | | | |273+0=273| | |
gatgctggaatcacccagagcccaagacacaaggtcacagagacaggaacaccagtgact
ctgagatgtcaccagactgagaaccaccgctacatgtactggtatcgacaagacccgggg
catgggctgaggctaatccattactcatatggtgttaaagatactgacaaaggagaagtc
tcagatggctatagtgtctctagatcaaagacagaggatttcctcctcactctggagtcc
gctaccagctcccagacatctgtgtacttctgt
>L33102|TRBV10-3*04|Homo sapiens|[F]|V-REGION|1..273|273 nt|1| | | | |273+0=273| | |
gatgctggaatcacccagagcccaagacacaaggtcacagagacaggaacaccagtgact
ctgagatgtcaccagactgagaaccaccgctacatgtactggtatcgacaagacccgggg
catgggctgaggctgatccattactcatatggtgttaaagatactgacaaaggagaagtc
tcagatggctatagtgtctctagatcaaagacagaggatttcctcctcactctggagtcc
gctaccagctcccagacatctgtgtacttctgt

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