FR-IMGT and CDR-IMGT lengths: Rainbow trout (Oncorhynchus mykiss) IGIV


Only FUNCTIONAL and ORF V-GENEs are shown.

IGIV
genes		 FR1-IMGT
1 to 26		 CDR1-IMGT
27 to 38		 FR2-IMGT
39 to 55		 CDR2-IMGT
56 to 65		 FR3-IMGT
66 to 104		 CDR3-IMGT
(germline V-GENE)
105 to 116
(26) (6-9,11) (16,17) (3,9,10,15(2)) (36,37) (8,10-12)
IGIV1S1
IGIV1S2
IGIV1S3
IGIV1S4
IGIV1S5		   8
 
8
9
11		   3 -3 (aa 73, 81, 82) 12
11 (1)
11 (1)
8 (1)
8 (1)
IGIV2S1
IGIV2S2
IGIV2S3
IGIV2S4
IGIV2S5
IGIV2S6
IGIV2S7
IGIV2S8
IGIV2S9
IGIV2S11
IGIV2S12
IGIV2S13		   6
6
6
6
6
6
6

6
7
6
6		  
 
 
 
 
 
 
 
 
 
 
-1 (aa 45)		 15 (2)
15 (2)
15 (2)
15 (2)
10
10
10
10
9
10
10
10
 -2 (aa 73, 81)
-2 (aa 73, 81)
-2 (aa 73, 81)
-2 (aa 73, 81)
-2 (aa 73, 81)
-2 (aa 73, 81)
-2 (aa 73, 81)
-2 (aa 73, 81)
-3 (aa 73, 74, 81)
-2 (aa 73, 81)
-3 (aa 73, 74, 81)
-2 (aa 73, 81)
 11
11
11
10 (1)
10 (1)
10 (1)
10 (1)
11
11
11
11
11

IMGT notes:
(1) Probable CDR3-IMGT length, but needs to be confirmed with germline sequences.
(2) Insertion of 5 amino acids between positions 60 and 61 in CDR2-IMGT (60A, 60B, 60C, 60D and 60E).

Created: 08/09/1999
Last updated: Friday, 22-Sep-2023 18:17:41 CEST
Authors: Sylvaine Artero and Nathalie Bosc