FR-IMGT and CDR-IMGT lengths: Charr (Salvelinus alpinus) IGHV

Only FUNCTIONAL and ORF V-GENEs are shown.

IGHV
subgroup		FR1-IMGT
1 to 26		CDR1-IMGT
27 to 38		FR2-IMGT
39 to 55		CDR2-IMGT
56 to 65		FR3-IMGT
66 to 104		CDR3-IMGT
(germline V-GENE)
105 to 115
(24 to 27)(7,8,10)(17)(6 to 8)(36 to 38)(2)(1)
1-1 (aa 10)7 7-1 (aa 73)2
2+2 (aa 6A,6B)
-1 (aa 10)		8 6,8-1 (aa 73)2
3-1 (aa 10)10 7-1 (aa 73)2
4-1 (aa 10)8 6-1 (aa 73)2
5-1 (aa 10)8 6,8-1 (aa 73)2
6-2 (aa 1,10)7 6,7-1 (aa 73)2
8 8 7-3 (aa 73,82,83)2
11-1 (aa 10)8 7-2 (aa 73,82)2

IMGT Note:
(1) Probable CDR3-IMGT length by comparison with Rainbow trout (Oncorhyncus mykiss) germline V-GENEs, but needs to be confirmed with germline sequences.

Created: 11/06/1998
Last updated: Friday, 22-Sep-2023 18:17:44 CEST
Author: Dominique Scaviner