FR-IMGT and CDR-IMGT lengths: Atlantic cod (Gadus morhua) IGIV

Only FUNCTIONAL and ORF V-GENEs are shown.

IGIV
genes		 FR1-IMGT
1 to 26		 CDR1-IMGT
27 to 38		 FR2-IMGT
39 to 55		 CDR2-IMGT
56 to 65		 FR3-IMGT
66 to 104		 CDR3-IMGT
(germline V-GENE)
105 to 116
(25) (7,8,11,12) (17) (3) (36,38) (8-12)
IGIV1S1
IGIV1S2
IGIV1S3
IGIV1S4
IGIV1S5
IGIV1S6
IGIV1S7
IGIV1S8
IGIV1S9
IGIV1S10
IGIV1S11
IGIV1S12
IGIV1S13
IGIV1S14
IGIV1S15
IGIV1S16
IGIV1S17
IGIV1S18
IGIV1S19
IGIV1S20
IGIV1S21
IGIV1S22
IGIV1S23
IGIV1S24
IGIV1S25
IGIV1S26
IGIV1S27
IGIV1S28
IGIV1S29		 -1 (aa 10) 12
12
12
12
12
12
12
12
12
11
11
11
11
11
11
11
11
11
8
8
8
8
8
8
8
8
8
7
7		  
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 		 3 -3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-1 (aa 73)		 12
12 (1)
12 (1)
9 (1)
9 (1)
11 (1)
10 (1)
11 (1)
11 (1)
11 (1)
12 (1)
11 (1)
8 (1)
12 (1)
11 (1)
12 (1)
11 (1)
8 (1)
9
12
9 (1)
8 (1)
8 (1)
8 (1)
11 (1)
12 (1)
11 (1)
12 (1)
8

IMGT note:
(1) Probable CDR3-IMGT length but needs to be confirmed with germline sequences.

Created: 22/03/2002
Last updated: Friday, 22-Sep-2023 18:17:44 CEST
Author: Nathalie Bosc