FR-IMGT and CDR-IMGT lengths: Goat (Capra hircus) TRAV

Only FUNCTIONAL and ORF V-GENEs are shown.

TRAV
genes 		FR1-IMGT
1 to 26		 CDR1-IMGT
27 to 38		 FR2-IMGT
39 to 55		 CDR2-IMGT
56 to 65		 FR3-IMGT
66 to 104		 CDR3-IMGT
(germline V-GENE)
105 to 115
(25,26) (5 to 7) (17) (3 to 7) (33 to 35) (1 to 5)
TRAV1S1 to
TRAV1S7		   7   6 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV2S1 to
TRAV2S3		 -1(aa 7) 7   4 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (1,4)*
TRAV3S1 -1(aa 7) 7   4 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) *
TRAV4S1 to
TRAV4S2		 -1(aa 7) 6   3 -7 (aa 71 to 77) +1 (aa 84A) (3,4)*
TRAV5S1 to
TRAV5S4		   6   6 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV6S1 to
TRAV6S2		   7   7 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (4,5)*
TRAV7S1   7   7 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (2)*
TRAV8S1 to
TRAV8S2		   7   6 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV9S1   6   5 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV10S1 to
TRAV10S2		   6   6 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (2,3)*
TRAV11S1   6   6 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV12S1   6   5 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV13S1   6   6 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (1)*
TRAV14S1   5   6 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (2)*
TRAV15S1   5   6 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (2)*
TRAV16S1 to
TRAV16S3		   5   4 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV17S1,
TRAV17S3 to TRAV17S4		   5   4 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV18S1   5   4 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
TRAV19S1   6   7 -7 (aa 71 to 77) +3 (aa 84A,84B,84C) (3)*
* Probable CDR3-IMGT length, but needs to be confirmed with germline sequences.

Created: 26/09/2002
Author: Géraldine Folch