FR-IMGT and CDR-IMGT lengths: Goat (Capra hircus) TRBV

Only FUNCTIONAL and ORF V-GENEs are shown.

TRBV
genes 		FR1-IMGT
1 to 26		 CDR1-IMGT
27 to 38		 FR2-IMGT
39 to 55		 CDR2-IMGT
56 to 65		 FR3-IMGT
66 to 104		 CDR3-IMGT
(germline V-GENE)
105 to 115
(26) (5,6) (17) (5 to 7) (36 to 38) (2 to 4)
TRBV1S1 to
TRBV1S3		   5   6 -2(aa 73,82) (3)*
TRBV2S1 to
TRBV2S2		   5   6 -1(aa 82) (2,4)*
TRBV3S1 to
TRBV3S2		   6   5 -2(aa 73,82) (2,3)*
TRBV4S1 to
TRBV4S2		   5   6 -2(aa 73,82) (3,4)*
TRBV5S1 to
TRBV5S2		   5   6 -1(aa 82) (3,4)*
TRBV6S1 to
TRBV6S2		   5   7 -1(aa 82) (2,3)*
TRBV7S1 to
TRBV7S2		   5   6 -2(aa 73,82) (3,4)*
TRBV8S1   5   6 -2(aa 73,82) (3)*
TRBV9S1   6   7 -1(aa 82) (3)*
TRBV10S1   5   6 -2(aa 73,82) (3)*
TRBV11S1 to
TRBV11S5		   5   6 -1(aa 82) (3)*
TRBV12S1   5   6 -2(aa 73,82) (4)*
TRBV13S1   5   6 -1(aa 82) (4)*
TRBV14S1   5   6 -2(aa 73,82) (4)*
TRBV15S1   5   6 -2(aa 73,82) (4)*
TRBV16S1   5   6 -3(aa 73,82,83) (4)*
TRBV17S1   5   6 -2(aa 73,82) (4)*
TRBV18S1   5   6 -2(aa 73,82) (4)*
* Probable CDR3-IMGT length, but needs to be confirmed with germline sequences.

Created: 26/09/2002
Author: Géraldine Folch