FR-IMGT and CDR-IMGT lengths: Zebrafish (Danio rerio)

Only FUNCTIONAL and ORF V-GENEs are shown.

IGHV
subgroup		 FR1-IMGT 1 to 26 CDR1-IMGT 27 to 38 FR2-IMGT 39 to 55 CDR2-IMGT 56 to 65 FR3-IMGT 66 to 104 CDR3-IMGT
(germline V-GENE)
105 to 115
(25) (7,8) (17) (3,7,8) (38) (2,3)
1 -1 (aa 10) 8   7 -1 (aa 73) 3
2 -1 (aa 10) 8   8 -1 (aa 73) 3 (1)
3 -1 (aa 10) 7   8 -1 (aa 73) 2 (1)
4 -1 (aa 10) 8   3 -1 (aa 73) 3 (1)

The proteolytic cleavage site between the leader peptide and the V-REGION is putative and the assignment of amino acid 1 to one or the other region is uncertain.

IMGT note:
(1) Probable CDR3-IMGT length but needs to be confirmed with germline sequences.

Created: 15/11/2001
Author: Nathalie Bosc