FR-IMGT and CDR-IMGT lengths: Zebrafish (Danio rerio) IGIV

Only FUNCTIONAL and ORF V-GENEs are shown.

IGIV
genes		 FR1-IMGT
1 to 26		 CDR1-IMGT
27 to 38		 FR2-IMGT
39 to 55		 CDR2-IMGT
56 to 65		 FR3-IMGT
66 to 104		 CDR3-IMGT
(germline V-GENE)
105 to 115
(25,26) (4,5,7,9-13) (17) (2,3,9,10) (36-39) (8-11)
IGIV1S1
IGIV1S2
IGIV1S3
IGIV1S4
IGIV1S5
IGIV1S6
IGIV1S7
IGIV1S8
IGIV1S9		  
-1 (aa 10)
 
 
 
 
 
 
-1 (aa 7)		 13 (2)
13 (2)
12
11
10
9
9
9
7		   2
3
3
3
3
3
3
3
3		 -3 (aa 73,81,82)
-1 (aa 73)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-3 (aa 73,81,82)
-1 (aa 73)
-1 (aa 73)
 
 		 11 (1)
10 (1)
11 (1)
10 (1)
9 (1)
11 (1)
8 (1)
11 (1)
11 (1)
IGIV2S1
IGIV2S2		 -1 (aa 9)
 		 4
5		   9
10		 -2 (aa 73,81)
-2 (aa 73,81)		 9
8 (1)

IMGT notes:
(1) Probable CDR3-IMGT length but needs to be confirmed with germline sequences.
(2) Insertion of 1 amino acid between position 32 and 33 in CDR1-IMGT (32A).

Created: 22/04/2003
Author: Nathalie Bosc