Reference for this table: | Lefranc, M.-P., Pallarès, N. and Frippiat, J.-P., Hum. Genet., 104, 361-369 (1999) |
Probes used are IGLV subgroup specific and described in the corresponding publications.
IGLV gene name | RFLP alleles | Enzymes | Fragments (kb) | Polymorphism type (1) | Frequencies | |||||||||
American (2) | American with SLE (2) (3) | Caucasoid | Caucasoid with RA (3) | French | Japanese | Japanese with DCM (3) | Japanese with silicosis | Mandenka (4) | Tunisian | |||||
1-41 | *A1 | KpnI (5) | 10.5 | I/RS | 0.47 [5] | |||||||||
*A2 | 4.6 | RS | 0.31 [5] | |||||||||||
*A3 | 17.0 | RS | 0.19 [5] | |||||||||||
*A4 | 24.0 | RS | 0.03 [5] | |||||||||||
2-8 | *A1 | HindIII | 16.0 [1]/20.0 [3] | 0.39 [3] | 0.48 [3] | 0.50 [1] | ||||||||
*A2 | 9.0 [1]/10.0 [3] | 0.61 [3] | 0.52 [3] | 0.50 [1] | ||||||||||
3-19 | *A1 | HindIII | 7.8 | 0.69 [2] | ||||||||||
*A2 | 3.2 | 0.31 [2] | ||||||||||||
5-39 | *A1 | HindIII | 3.9 | |||||||||||
*A2 | - | D | 0.35 [8] | |||||||||||
6-57 | *A1 | HindIII | 5.2 | 0.98 [8] | ||||||||||
*A2 | 7.4 | 0.01 [8] | ||||||||||||
*A3 | 7.6 | 0.01 [8] | ||||||||||||
7-43 | *A1 | BamHI (5) | 4.7 [5]/5.3 [4][6] | RS | 0.52 [5] | 0.55 [4] | 0.39 [4] | 0.38 [6] | ||||||
*A2 | 3.0 [5]/3.3 [4][6] | RS | 0.48 [5] | 0.45 [6] | 0.61 [4] | 0.62 [6] | ||||||||
*B1 | KpnI (5) | 16.0 | I/RS | 0.47 [5] | ||||||||||
*B2 | 13.0 | RS | 0.31 [5] | |||||||||||
*B3 | 17.0 | RS | 0.19 [5] | |||||||||||
*B4 | 24.0 | RS | 0.03 [5] | |||||||||||
*C1 | TaqI | 12.9 | 0.46 [7] | 0.49 [7] | ||||||||||
*C2 | 9.2 | 0.34 [7] | 0.36 [7] | |||||||||||
*C3 | 4.2 | 0.17 [7] | 0.15 [7] | |||||||||||
8-61 | *A1 | HindIII | 7.3 | 1.00 [8] | 1.00 [8] | 0.96 [8] | ||||||||
*A2 | - | D | 0.00 [8] | 0.00 [8] | 0.04 [8] | |||||||||
(I)-42 | *A1 | BamHI (5) | 4.7 | RS | 0.52 [5] | |||||||||
*A2 | 3.0 | RS | 0.48 [5] | |||||||||||
*B1 | KpnI (5) | 16 | I/RS | 0.47 [5] | ||||||||||
*B2 | 13 | RS | 0.31 [5] | |||||||||||
*B3 | 17 | RS | 0.19 [5] | |||||||||||
*B4 | 24 | RS | 0.03 [5] |
IMGT notes:
(1) | RS, polymorphic Restriction Sites; D, Deletion; I, Insertion. |
(2) | Racially mixed. |
(3) | DCM, Dilated cardiomyopathy; RA, Rheumatoïd arthritis; SLE, Systemic lupus erythematosus. |
(4) | East Senegal. |
(5) | Four different haplotypes have been defined by the KpnI polymorphic restriction fragments of the IGLV7-43, (I)-42, and V1-41 genes, with associated polymorphic BamHI fragments of the 7-43 and (I)-42 genes (see table 2 in reference [5]). |
References :
[1] | Blancher, A. et al., Nucleic Acids Res., 18, 6178 (1990). |
[2] | Chuchana, P. et al., Nucleic Acid Res., 18, 6179 (1990). |
[3] | Paul, E. et al., J. Immunol., 147, 2771-2776 (1991). |
[4] | Nishi, H. et al., Jpn. Circ. J., 56, 1054-1061 (1992). |
[5] | Chuchana, P. et al., Am. J. Hum. Genet., 53, 518-525 (1993). |
[6] | Honda, K. et al., Am. J. Respir. Cell. Mol. Biol., 8, 106-111 (1993). |
[7] | Sidebottom, D. et al., Exp. Clin. Immunogenet., 10, 129-136 (1993). |
[8] | Lefranc, M.-P. et al., Hum. Genet., 104, 361-369 (1999). |
Created: 04/08/1999
Authors: Violaine Moreau and Marie-Paule Lefranc