Alignment of alleles: Goat (Capra hircus) TRAV14S1

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

N (Asn, asparagine) of potential N-glycosylation sites (NXS/T, where X is different from P), (N-linked glycosylation) is shown is green (site is underlined in CHS and in pages edited before 14/10/2009).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 T   Q   Q   L   E   Q   N   P   K   F   L   R   I   Q   E   G   G   N   V   T
  AF318546,TRAV14S1*01          ACC CAG CAG CTG GAG CAG AAT CCG AAG TTT CTA CGT ATC CAA GAG GGA GGA AAT GTC ACC

                                                        ___________________CDR1-IMGT____________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 V   Y   C   N   S   S   S   T   F   T   F                                   F
  AF318546,TRAV14S1*01          GTG TAC TGC AAC TCC TCA AGC ACC TTC ACC TTC ... ... ... ... ... ... ... ... TTT

                                                                                            _______________CDR2-
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60 
                                 Q   W   Y   R   Q   K   P   E   E   G   P   V   L   L   V   T   L   T   K   P
  AF318546,TRAV14S1*01          CAG TGG TAC AGA CAG AAG CCC GAG GAA GGG CCT GTC CTC TTG GTG ACA TTA ACT AAA CCA

                                IMGT________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                 K   E               V   K   E   Q   K                               R   I   R
  AF318546,TRAV14S1*01          AAA GAA ... ... ... GTG AAG GAG CAG AAG ... ... ... ... ... ... ... AGA ATA AGG

                                 81  82  83  84 84A 84B 84C  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                 A   E   F   G   E   A   R   K   D   S   S   L   L   I   T   A   A   Q   P   G   D   A   G
  AF318546,TRAV14S1*01          GCT GAG TTT GGT GAA GCA AGA AAG GAT AGC TCG CTT CTC ATC ACT GCA GCC CAG CCT GGG GAT GCG GGC

                                                _CDR3-IMGT_
                                101 102 103 104 105 106 
                                 T   Y   L   C   A   G
  AF318546,TRAV14S1*01          ACC TAC CTG TGT GCA GGG #c
#c : rearranged cDNA

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 26/09/2002
Author: Géraldine Folch