Alignment of alleles: Goat (Capra hircus) TRBV10S1

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).


                                1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                               D   A   Q   V   T   Q   T   P   R   Y   L   V   K   R   R   G   E   K   V   V
  U59401  ,TRBV10S1*01        GAT GCA CAA GTA ACC CAA ACT CCA AGA TAT CTG GTC AAA AGG AGG GGA GAG AAA GTT GTG

                                                      ____________________CDR1-IMGT__________________
                               21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                               I   E   C   M   Q   N   M   D   H   E   R                               M   F
  U59401  ,TRBV10S1*01        ATA GAA TGT ATG CAG AAC ATG GAC CAT GAG AGA ... ... ... ... ... ... ... ATG TTC

                                                                                          ______________CDR2-
                               41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                               W   Y   R   Q   D   P   A   L   G   L   R   L   L   H   F   S   I   D   V   D
  U59401  ,TRBV10S1*01        TGG TAC CGA CAA GAC CCA GCT CTG GGG CTA CGG CTG CTC CAT TTC TCA ATC GAT GTT GAC

                              IMGT_______________
                               61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                               V                   L   E   E   G   D   V   P       Y   G   Y   S   V   S   R
  U59401  ,TRBV10S1*01        GTG ... ... ... ... CTT GAG GAA GGG GAT GTG CCC ... TAT GGG TAC AGC GTC TCC AGA


                               81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                               T       K   K   K   S   F   P   L   T   L   E   S   A   T   T   N   Q   T   A
  U59401  ,TRBV10S1*01        ACA ... AAG AAG AAG AGC TTC CCT CTG ACC CTG GAG TCT GCC ACC ACC AAC CAG ACG GCT

                                              ___CDR3-IMGT___
                              101 102 103 104 105 106 107 108
                               M   Y   L   C   A   S   S   K
  U59401  ,TRBV10S1*01        ATG TAC CTC TGC GCC AGC AGT AAA    #c

#c: rearranged cDNA.

Created: 26/09/2002
Author: Géraldine Folch