Alignment of alleles: Goat (Capra hircus) TRBV11S3

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).


                                1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                               A   G   V   V   S   Q   S   P   G   Y   R   V   T   G   R   S   Q   N   V   T
  L18954  ,TRBV11S3*01        GCT GGA GTA GTG TCC CAG TCA CCT GGG TAC AGG GTC ACA GGG AGG AGC CAG AAT GTG ACT

                                                      ____________________CDR1-IMGT__________________
                               21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                               L   R   C   D   P   I   P   G   H   Q   V                               L   Y
  L18954  ,TRBV11S3*01        CTA AGG TGT GAT CCA ATT CCT GGT CAC CAA GTC ... ... ... ... ... ... ... CTT TAC
                                                                                          ______________CDR2-
                               41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                               W   Y   R   Q   M   L   G   Q   G   P   E   Y   L   T   Y   F   Q   G   K   E
  L18954  ,TRBV11S3*01        TGG TAC CGA CAG ATG CTG GGG CAG GGT CCA GAG TAC CTG ACT TAT TTT CAG GGC AAG GAG

                              IMGT_______________
                               61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                               E                   P   D   K   S   G   M   P   K   N   R   F   S   A   E   R
  L18954  ,TRBV11S3*01        GAA ... ... ... ... CCA GAC AAA TCA GGA ATG CCT AAA AAC CGG TTT TCT GCT GAG AGG


                               81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                               P       E   S   T   Y   S   Y   L   K   I   Q   P   V   E   P   K   D   S   A
  L18954  ,TRBV11S3*01        CCT ... GAG AGC ACA TAC TCC TAT CTC AAG ATC CAG CCA GTG GAG CCC AAG GAC TCA GCC


                              101
                               V
  L18954  ,TRBV11S3*01        GTG     °
° DNA genomic sequence, but not known to be rearranged or germline.

Created: 26/09/2002
Author: Géraldine Folch